Arthrobacter woluwensis: G8758_01900
Help
Entry
G8758_01900 CDS
T08936
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
aww
Arthrobacter woluwensis
Pathway
aww03030
DNA replication
aww03410
Base excision repair
aww03420
Nucleotide excision repair
aww03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aww00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G8758_01900 (ligA)
03410 Base excision repair
G8758_01900 (ligA)
03420 Nucleotide excision repair
G8758_01900 (ligA)
03430 Mismatch repair
G8758_01900 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aww03032
]
G8758_01900 (ligA)
03400 DNA repair and recombination proteins [BR:
aww03400
]
G8758_01900 (ligA)
Enzymes [BR:
aww01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
G8758_01900 (ligA)
DNA replication proteins [BR:
aww03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
G8758_01900 (ligA)
DNA repair and recombination proteins [BR:
aww03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
G8758_01900 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G8758_01900 (ligA)
MMR (mismatch excision repair)
DNA ligase
G8758_01900 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
G8758_01900 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
Nlig-Ia
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
BRCT_2
PGRL1_N
Auto_anti-p27
RNA_lig_T4_1
Motif
Other DBs
NCBI-ProteinID:
QTF73521
LinkDB
All DBs
Position
441835..444135
Genome browser
AA seq
766 aa
AA seq
DB search
MKDDVVEPSGGTPAEALREEYQHLADEVRRYRHAYYQEDEPLISDAEFDELYLRLERFEA
LHPELVSNDSPTQEVGGEVSSAFAAVEHLSRMYSLEDVFSLEELTAWVEKTLASTETLGL
ARPRWLTELKIDGLAVNLLYRDGKLVRAATRGDGTTGEDITHNVLTIKEIPRELSGTGHP
AEVEIRGEVFIPSKAFEEYNEVLIAQGKAPLANPRNAAAGSLRQKDPAETAKRPLSMYVH
GIGRHEGLDLASQSDFYALLQEWGLPTSPYFRVLDTLEEVLAFIAEYGEKRHSLIHEIDG
IVVKVDQLAVQRQLGHTSRVPRWAVAYKYPPEEVHTKLLDIRVNVGRTGRVTPYGVMEPV
KVAGSTVEMATLHNQDVVKAKGVLIGDTVVLRKAGDVIPEIVGPVLALRDGTEHAFVMPE
TCPSCGTPLAPGKEGDVDLRCPNARSCPAQLRQRVAHLAGRGAFDIEALGDEAALALTAG
PGPDPAETGGLVQPTGPGVLTDESRVFDLASETAGADLRAALGEVKVWREKRVKGAGTGV
WELKPYFWTQGTAKSPAGPSANTKKLFTELEKAKSQPLWRVLVALSIRHVGPTASRALAT
AFGSMNAIREASEEQLANVDGVGPTIAAAVKEWFADDWHVNIVDAWAAAGVRMADEVDES
MPKTLEGLTVVVTGTLPTLSRDQAKEAIIIRGGKAAGSVSKNTSYLVAGEAAGSKLDKAE
QLGVPVLDEDAFRILLEKGPAGLPGGEPEGAGETPSEDLPEESGDE
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgacgtcgtggagccttccggcggcaccccggcggaggccctccgtgaggag
taccagcacctggcggatgaggtccgccggtaccggcacgcctactaccaggaggacgag
cccctcatcagcgacgccgagttcgacgagctgtatctgcgcctcgagcgcttcgaagcg
ctgcaccctgaactggtgtcgaatgactcgcccacgcaggaggtcggcggcgaggtgtcc
tcggcgttcgccgccgtcgagcatctgagccgcatgtacagcctggaggacgtgttctcc
ctcgaggagctgacggcgtgggtcgagaagacgctcgccagcacggagaccctcgggctg
gcgaggccgcgctggctcacggagctgaagatcgacggcctcgccgtgaacctgctgtac
cgggacggcaagctggtccgagcggccacccgtggcgacggcaccacgggcgaggacatc
acgcacaacgtgctgaccatcaaggagatcccgcgggagctctccggcacggggcacccg
gccgaggtggagatccgcggcgaggtgttcatcccgtccaaggcgttcgaggagtacaac
gaggtcctcatcgcgcagggcaaggcgccgctggccaatccccggaacgcggccgccggc
tcgctccgccagaaggatcccgccgagaccgccaagcgcccgctgtcgatgtacgtgcac
ggcatcggccgccacgagggactcgacctggcgtcccagtccgacttctacgccctgctc
caggaatggggcctgcccaccagtccgtacttcagggtgctggacacgctggaagaggtc
ctcgcgttcatcgccgagtacggagagaagcgccacagcctgatccacgagatcgacggc
atcgtggtcaaggtcgaccagctcgccgtgcagcgccagctcggccacacctctcgcgtg
ccgcgctgggcggtcgcgtacaagtacccgcctgaggaagtgcacaccaagctcctggac
atccgggtcaacgtcggccgcacgggccgcgtcaccccgtacggcgtcatggagccggtg
aaggtggcgggctccaccgtcgagatggccaccctgcacaaccaggacgtcgtgaaggcc
aagggcgtactcatcggggacaccgtggtgctccgcaaggccggtgacgtcatcccggag
atcgtcggcccggtcctcgccctgcgggacggcaccgagcacgccttcgtcatgccggag
acctgcccgtcctgtggcacgcctctggcgccaggcaaggaaggcgacgtcgaccttcgc
tgccccaacgcccgctcctgccccgcccagctccgccagcgggtggcgcacctggccggc
cgcggcgccttcgacatcgaggccctgggtgacgaagccgccctcgccctgacggccgga
ccgggacccgaccctgccgagaccggcggactggtccagccgaccgggcccggtgtcctg
acggacgagtcgcgggtgttcgacctcgcctcggagacggcgggcgccgatctgcgcgcg
gctctgggcgaggtgaaggtctggcgggagaagcgcgtgaagggcgcggggaccggggtc
tgggagctgaagccgtacttctggacccagggcacggccaagtcgccggccggcccgagc
gccaacaccaagaagctcttcaccgagctggagaaggccaaatcgcagccgctctggcgc
gtcctcgtggcgctgtccatccggcatgtcgggccgacggccagccgggccctggccacc
gccttcggctcgatgaacgcgatccgcgaggcgtcagaggagcagctggccaacgtggac
ggggtgggtcccaccatcgccgccgcggtcaaggagtggttcgcggacgactggcacgtg
aacatcgtcgacgcgtgggccgccgccggggtgcggatggccgacgaggtggatgagtcc
atgccgaagaccctcgagggcctgaccgtggtggtcacgggcacgctgcccaccctgagc
cgcgatcaggcgaaggaagccatcatcatccgtggcggcaaggccgcggggtcggtctcg
aagaacacgtcttacctggtggccggtgaggccgcgggctccaagctggacaaggccgag
cagctgggcgtcccggtcctggacgaggacgcgttccggatcctcctggagaagggcccc
gcgggcttgcctggcggagagcccgagggagccggggagacgccgtccgaggatcttccc
gaggagtccggggatgagtga
DBGET
integrated database retrieval system
