Achromobacter xylosoxidans NCTC10807: ERS451415_01402
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Entry
ERS451415_01402 CDS
T04522
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
axx
Achromobacter xylosoxidans NCTC10807
Pathway
axx03030
DNA replication
axx03410
Base excision repair
axx03420
Nucleotide excision repair
axx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
axx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ERS451415_01402 (ligA)
03410 Base excision repair
ERS451415_01402 (ligA)
03420 Nucleotide excision repair
ERS451415_01402 (ligA)
03430 Mismatch repair
ERS451415_01402 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
axx03032
]
ERS451415_01402 (ligA)
03400 DNA repair and recombination proteins [BR:
axx03400
]
ERS451415_01402 (ligA)
Enzymes [BR:
axx01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ERS451415_01402 (ligA)
DNA replication proteins [BR:
axx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ERS451415_01402 (ligA)
DNA repair and recombination proteins [BR:
axx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ERS451415_01402 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ERS451415_01402 (ligA)
MMR (mismatch excision repair)
DNA ligase
ERS451415_01402 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ERS451415_01402 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH
BRCT_2
Zn_ribbon_NUD
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
CKH03182
UniProt:
A0ACG8ART0
LinkDB
All DBs
Position
1:1536280..1538379
Genome browser
AA seq
699 aa
AA seq
DB search
MSKAGGTPAAETAARLRAEIEQHNVRYYVYDDPSISDAEYDRLMRELQDLEAAHPELVTP
ESPTQRVGAAPVSAFGSVRHAVPMLSLGNAFDEEDVVAFDRRVTDTLRGAGLLGPAQQAE
YFCELKLDGLAISLRYEDGRLVQAATRGDGQTGEDVTSNIRTIKAIPLQLSGPAPKVLEV
RGEVLMNRADFEKLNAAQAKRDEKVFVNPRNAAAGSLRQLDPRITAKRPLRFFAYGWGEV
RGLPGTQSGLFDEASAGAADASTLPEKSHGAMLDWLASLGLPVNVKHNHRATGAEGLMAF
YAKVGALRPELPYDIDGVVYKVDSLPAQKLLGFVARAPRFALAHKFPAEEATTTLLDIEV
QVGRTGAITPVARLKPVFVGGVTVTNATLHNEDEIRRKDVRIGDTVIVRRAGDVIPEVVG
AVLEKRPADAREFVMPKACPVCGSAIERLEDETIARCTGGLFCAAQRKQTLWHAASRKAL
DIEGLGEKLVEQLVDSGRVKSLADLFSLRPLELVGLDRMGQKSADNLVEAIDKARAPALG
RLLFALGIRHVGETTARDVARHFGSIEAIMDADEDALSSVPDVGPVVAGSIRRFFAEQHN
RDVIGQLKAQGVHAVAEAVPQDTTLAGKTFVLTGTLPNWTREEASMRIQAAGGKVSGSVS
KKTAYLVAGEDAGSKLTKAQELGVTVLDEDGLKELLGSS
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggccggagggacccccgcggcggaaaccgcggcgcgcctgcgcgcggaaatc
gagcagcacaacgtccgctattacgtctacgacgacccgtcgatctcggatgccgaatac
gaccgcttgatgcgcgagctgcaggacctggaagccgcgcatcccgaactggtcacgccc
gaatcgcccacgcagcgggtcggcgcggcgccggtctcggccttcggcagcgtgcgccac
gcggtgccgatgctgtcgctgggcaacgccttcgacgaagaagacgtcgtggcgttcgac
cgccgcgtcaccgatacgctgcgcggcgccggcctgctgggcccggcgcagcaggccgaa
tacttctgtgaactcaagctcgatggcctggcgatcagcctgcgctacgaggacggccgg
ctggtgcaggccgccacccgtggcgacggccagacgggcgaggacgtcacctccaatatc
cgcacgatcaaggcgatcccgctgcagctgagcggcccggcgcccaaggtgctggaggtg
cgcggcgaagtgctgatgaaccgcgccgatttcgagaaactcaacgcggcccaggccaag
cgcgacgagaaggtcttcgtcaacccgcgcaacgccgccgccggcagcctgcgccagctc
gacccgcgcatcaccgccaagcggccgctgcgctttttcgcctacggctggggcgaggtg
cggggcctgccgggcacgcagagcggcctgttcgacgaagcgtcggccggcgcggcggat
gcctcgaccctgcccgagaaatcgcatggcgccatgctcgactggctggcgtcgctgggc
ctgccggtcaatgtgaagcacaaccaccgcgccaccggcgccgagggcctgatggcgttc
tacgccaaggtcggcgccctgcggcccgagctgccctacgacatcgacggcgtggtctac
aaggtggattcgctgccggcgcagaaactgctgggcttcgtggcgcgcgcgccgcgcttt
gcgctggcgcacaaattcccggccgaggaagccaccaccacgctgctggacatcgaagtg
caggtcggccgtaccggcgccatcaccccggtcgcccggctcaagccggtgttcgtgggc
ggcgtgaccgtcaccaacgccacgctgcacaacgaagacgagatccgccgcaaggacgtg
cgcatcggtgacaccgtcatcgtgcgtcgcgccggcgacgtgattccggaggtggtgggc
gcggtgctcgagaagcgtcccgccgacgcgcgcgagttcgtcatgcccaaggcctgcccg
gtctgtggctcggcgatcgagcgcctggaagacgaaaccatcgcccgctgcaccggcggg
ctgttctgcgccgcgcagcgcaaacagacgctgtggcacgcggccagccgcaaggcgctc
gatatcgagggcctgggcgagaagctggtggagcaattggtggacagcggccgcgtcaaa
tcgctggccgacctgttcagcctgcgcccgctcgaactggtcgggctggaccgcatgggc
cagaagtcggccgacaacctggtcgaggccatcgacaaggcgcgcgcgccggcgttggga
cgcctgctgttcgcgctgggcatccgccacgtgggcgagaccacggcgcgcgacgtggcc
cggcactttggcagcatcgaggccatcatggacgccgacgaggacgcgctgtcctccgtg
ccggacgtggggccggtggtggcggggtcgatccgccgcttcttcgccgaacagcacaat
cgcgacgtgatcgggcagctcaaggcccagggcgtgcatgcggtggccgaggccgtgccg
caggacaccacgctggcgggcaagaccttcgtgctgactggcacgctgcccaactggacg
cgcgaggaagcctccatgcgcatccaggccgcgggcggcaaggtcagcggctcggtgtcc
aagaagaccgcctatctcgtggccggcgaagacgccggcagcaagctcaccaaggcccag
gaactgggcgtcacggtgctggacgaggacgggctcaaggaattgctgggttcctcttga
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integrated database retrieval system
