KEGG   Azorhizobium caulinodans: AZC_0149
Entry
AZC_0149          CDS       T00609                                 
Name
(GenBank) NAD-dependent DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
azc  Azorhizobium caulinodans
Pathway
azc03030  DNA replication
azc03410  Base excision repair
azc03420  Nucleotide excision repair
azc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:azc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AZC_0149
   03410 Base excision repair
    AZC_0149
   03420 Nucleotide excision repair
    AZC_0149
   03430 Mismatch repair
    AZC_0149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:azc03032]
    AZC_0149
   03400 DNA repair and recombination proteins [BR:azc03400]
    AZC_0149
Enzymes [BR:azc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     AZC_0149
DNA replication proteins [BR:azc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AZC_0149
DNA repair and recombination proteins [BR:azc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     AZC_0149
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AZC_0149
   MMR (mismatch excision repair)
    DNA ligase
     AZC_0149
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      AZC_0149
SSDB
Motif
Pfam: DNA_ligase_aden OB_DNA_ligase HHH_2 Nlig-Ia BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT HALZ
Other DBs
NCBI-ProteinID: BAF86147
UniProt: A8IGY0
LinkDB
Position
complement(178214..180433)
AA seq 739 aa
MTANRPALPTRDKAVSDLSATEASDEHAALSQEIASHDARYYQEDAPVISDADYDRLRRR
YEDIEARFPALKNDDSLSRKVGAAPSAKFAKVVHQVPMLSLQNAFSDEEVEEFVARVRRF
LNLAESAELAFTAEPKIDGLSCSLRYEGGVLVRAATRGDGTQGEDVTANVRTIAEIPHRL
TGAGVPDIIDIRGEVYMGKADFLALNARQEEAGKPVFANPRNAAAGSLRQLDPEITRSRP
LRFFAYAWGQAEPGPPGASQHEVVDAFRRFGLPTNPLTIRVTDAAGLLAHYRKIGAERAS
LGYDIDGVVYKVDSLALQERLGFVSRSPRWAIAHKFAAEQATTVIEAIEIQVGRTGALTP
VAKLTPVTVGGVVVSNATLHNEDYIRAIGGNGEEIREGIDIRVGDTVVVQRAGDVIPQVV
SVVLDKRPAGATAYQFPHHCPVCNSQAVREVDPKTGKQDAVRRCTGGLICPAQAVERLRH
FVSRNAFDIEGLGEKQAHAFYEWKLIAEPADIFRLQARNEQSLSKLENREGWGRTSAQNL
FAAIEARRTIALDRFIFALGIRHVGETNAKRLARHYGSVEALRDAAIGAEMPTEMEEASE
ETPPTRRRKPQGNEVWQEMTDIDGIGAVVAEAVVEFFREPHNRQVVEELLKEVTPQPLEA
VASTSPVSGKTVVFTGSLERMTRDEAKAMAERLGAKVAGSVSGKTDLLVAGPGAGSKLEK
ARSLGVKTITEDEWFDLVG
NT seq 2220 nt   +upstreamnt  +downstreamnt
atgaccgcgaaccgccccgcccttccgacccgcgacaaggccgtctccgacctctcggcg
accgaggcctccgacgaacatgccgcactctcgcaggagatcgcgtcccacgacgcgcgc
tactatcaggaggacgcgccggtcatttcggatgccgattacgaccggctgcggcggcgc
tatgaagacatcgaggcgcgcttccccgcgctcaagaatgacgacagcctctcgcgcaag
gtgggcgcggcgccttcggcgaaattcgccaaggtggtccatcaggtgcccatgctctcg
ctccagaacgccttctccgacgaggaggtcgaggagttcgtggcccgcgtgcggcgcttc
ctcaatctggccgagagcgcggaactcgccttcaccgccgagccgaagatcgacggcctg
tcctgctccctgcgctacgagggcggcgttctggtgcgggcggcgacgcgcggcgacggg
acgcagggcgaggacgtgaccgccaacgtgcgcaccattgccgaaatcccccatcgcctg
acgggcgcgggcgtgccggacatcatcgatatccggggcgaggtctatatgggcaaggcg
gacttcctcgccctcaacgcccggcaggaagaggccggcaagccggtgttcgccaatccg
cgcaatgcggcggcgggctcgctccgccagctcgatcccgaaatcacccggtcgcgcccc
ttgcgcttcttcgcttatgcctgggggcaggccgagcccggcccgcccggcgccagccag
catgaggtggtggacgccttccggcgcttcggcctgcccaccaatccgctcaccatccgc
gtcaccgatgcggcggggctgctggcccattaccggaagatcggggcggagcgcgcgagc
ctcggctatgacatcgacggcgtggtctacaaggtggacagcctcgcgcttcaggagcgc
ctcggcttcgtctcccgctcgccgcgctgggccatcgcccacaagttcgccgccgagcag
gcgaccacggtcatcgaggccatcgagatccaggtcggccgcaccggggcgctcacgccg
gtggcgaagctcacgcccgtcaccgtgggcggcgtcgtcgtctccaacgcgacgctgcac
aatgaggattacatccgcgccatcggcggcaatggcgaagagatccgcgagggcatcgac
atccgcgtcggcgacaccgtggtggtccagcgcgccggcgatgtgatcccgcaggtggtc
tccgtggtgctggacaagcgcccggccggggccacggcctatcagttcccgcaccactgc
cccgtctgcaacagccaggcggtgcgcgaggtggaccccaagaccggcaagcaggatgcg
gtgcgccgctgcaccggcggcctcatctgcccggcgcaggcggtggagcggctgcgccac
ttcgtctcccgcaacgccttcgacatcgaggggctcggcgagaagcaggcccacgctttc
tatgagtggaagctgatcgcggagccggcggacatcttccgccttcaggcccgcaacgaa
cagtcgctctcgaagctggaaaaccgcgaaggctggggcaggacctcggcgcagaacctc
ttcgccgccatcgaggcccggcgcaccatcgcgctcgaccgcttcatcttcgccctcggc
atccgccatgtgggcgagaccaatgccaagcggctcgcccgccattacggctcggtggag
gccctgcgcgatgccgccatcggcgccgagatgcccaccgagatggaggaggcctccgag
gagaccccgcccacccgccgccgcaagccgcagggcaatgaggtgtggcaggagatgacg
gacatcgacggcatcggcgccgtggtggccgaggcggtggtggagttcttccgcgagccg
cacaaccggcaggtcgtggaagagctgctgaaggaagtgacgccccagccgctggaggcc
gtcgcctcaacgtcgcccgtctcgggcaagaccgtggtcttcaccggatccttggagcgc
atgacccgcgacgaggccaaagccatggccgagcgcctcggcgccaaggtcgccggctcg
gtctccggcaagaccgaccttctggtcgctggccccggcgcgggctccaagctggagaag
gcccgcagcctcggggtgaagaccatcaccgaggacgagtggttcgatctggtgggctga

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