Azorhizobium caulinodans: AZC_0149
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Entry
AZC_0149 CDS
T00609
Name
(GenBank) NAD-dependent DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
azc
Azorhizobium caulinodans
Pathway
azc03030
DNA replication
azc03410
Base excision repair
azc03420
Nucleotide excision repair
azc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
azc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AZC_0149
03410 Base excision repair
AZC_0149
03420 Nucleotide excision repair
AZC_0149
03430 Mismatch repair
AZC_0149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
azc03032
]
AZC_0149
03400 DNA repair and recombination proteins [BR:
azc03400
]
AZC_0149
Enzymes [BR:
azc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
AZC_0149
DNA replication proteins [BR:
azc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AZC_0149
DNA repair and recombination proteins [BR:
azc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
AZC_0149
NER (nucleotide excision repair)
GGR (global genome repair) factors
AZC_0149
MMR (mismatch excision repair)
DNA ligase
AZC_0149
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AZC_0149
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
Nlig-Ia
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HALZ
Motif
Other DBs
NCBI-ProteinID:
BAF86147
UniProt:
A8IGY0
LinkDB
All DBs
Position
complement(178214..180433)
Genome browser
AA seq
739 aa
AA seq
DB search
MTANRPALPTRDKAVSDLSATEASDEHAALSQEIASHDARYYQEDAPVISDADYDRLRRR
YEDIEARFPALKNDDSLSRKVGAAPSAKFAKVVHQVPMLSLQNAFSDEEVEEFVARVRRF
LNLAESAELAFTAEPKIDGLSCSLRYEGGVLVRAATRGDGTQGEDVTANVRTIAEIPHRL
TGAGVPDIIDIRGEVYMGKADFLALNARQEEAGKPVFANPRNAAAGSLRQLDPEITRSRP
LRFFAYAWGQAEPGPPGASQHEVVDAFRRFGLPTNPLTIRVTDAAGLLAHYRKIGAERAS
LGYDIDGVVYKVDSLALQERLGFVSRSPRWAIAHKFAAEQATTVIEAIEIQVGRTGALTP
VAKLTPVTVGGVVVSNATLHNEDYIRAIGGNGEEIREGIDIRVGDTVVVQRAGDVIPQVV
SVVLDKRPAGATAYQFPHHCPVCNSQAVREVDPKTGKQDAVRRCTGGLICPAQAVERLRH
FVSRNAFDIEGLGEKQAHAFYEWKLIAEPADIFRLQARNEQSLSKLENREGWGRTSAQNL
FAAIEARRTIALDRFIFALGIRHVGETNAKRLARHYGSVEALRDAAIGAEMPTEMEEASE
ETPPTRRRKPQGNEVWQEMTDIDGIGAVVAEAVVEFFREPHNRQVVEELLKEVTPQPLEA
VASTSPVSGKTVVFTGSLERMTRDEAKAMAERLGAKVAGSVSGKTDLLVAGPGAGSKLEK
ARSLGVKTITEDEWFDLVG
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgaaccgccccgcccttccgacccgcgacaaggccgtctccgacctctcggcg
accgaggcctccgacgaacatgccgcactctcgcaggagatcgcgtcccacgacgcgcgc
tactatcaggaggacgcgccggtcatttcggatgccgattacgaccggctgcggcggcgc
tatgaagacatcgaggcgcgcttccccgcgctcaagaatgacgacagcctctcgcgcaag
gtgggcgcggcgccttcggcgaaattcgccaaggtggtccatcaggtgcccatgctctcg
ctccagaacgccttctccgacgaggaggtcgaggagttcgtggcccgcgtgcggcgcttc
ctcaatctggccgagagcgcggaactcgccttcaccgccgagccgaagatcgacggcctg
tcctgctccctgcgctacgagggcggcgttctggtgcgggcggcgacgcgcggcgacggg
acgcagggcgaggacgtgaccgccaacgtgcgcaccattgccgaaatcccccatcgcctg
acgggcgcgggcgtgccggacatcatcgatatccggggcgaggtctatatgggcaaggcg
gacttcctcgccctcaacgcccggcaggaagaggccggcaagccggtgttcgccaatccg
cgcaatgcggcggcgggctcgctccgccagctcgatcccgaaatcacccggtcgcgcccc
ttgcgcttcttcgcttatgcctgggggcaggccgagcccggcccgcccggcgccagccag
catgaggtggtggacgccttccggcgcttcggcctgcccaccaatccgctcaccatccgc
gtcaccgatgcggcggggctgctggcccattaccggaagatcggggcggagcgcgcgagc
ctcggctatgacatcgacggcgtggtctacaaggtggacagcctcgcgcttcaggagcgc
ctcggcttcgtctcccgctcgccgcgctgggccatcgcccacaagttcgccgccgagcag
gcgaccacggtcatcgaggccatcgagatccaggtcggccgcaccggggcgctcacgccg
gtggcgaagctcacgcccgtcaccgtgggcggcgtcgtcgtctccaacgcgacgctgcac
aatgaggattacatccgcgccatcggcggcaatggcgaagagatccgcgagggcatcgac
atccgcgtcggcgacaccgtggtggtccagcgcgccggcgatgtgatcccgcaggtggtc
tccgtggtgctggacaagcgcccggccggggccacggcctatcagttcccgcaccactgc
cccgtctgcaacagccaggcggtgcgcgaggtggaccccaagaccggcaagcaggatgcg
gtgcgccgctgcaccggcggcctcatctgcccggcgcaggcggtggagcggctgcgccac
ttcgtctcccgcaacgccttcgacatcgaggggctcggcgagaagcaggcccacgctttc
tatgagtggaagctgatcgcggagccggcggacatcttccgccttcaggcccgcaacgaa
cagtcgctctcgaagctggaaaaccgcgaaggctggggcaggacctcggcgcagaacctc
ttcgccgccatcgaggcccggcgcaccatcgcgctcgaccgcttcatcttcgccctcggc
atccgccatgtgggcgagaccaatgccaagcggctcgcccgccattacggctcggtggag
gccctgcgcgatgccgccatcggcgccgagatgcccaccgagatggaggaggcctccgag
gagaccccgcccacccgccgccgcaagccgcagggcaatgaggtgtggcaggagatgacg
gacatcgacggcatcggcgccgtggtggccgaggcggtggtggagttcttccgcgagccg
cacaaccggcaggtcgtggaagagctgctgaaggaagtgacgccccagccgctggaggcc
gtcgcctcaacgtcgcccgtctcgggcaagaccgtggtcttcaccggatccttggagcgc
atgacccgcgacgaggccaaagccatggccgagcgcctcggcgccaaggtcgccggctcg
gtctccggcaagaccgaccttctggtcgctggccccggcgcgggctccaagctggagaag
gcccgcagcctcggggtgaagaccatcaccgaggacgagtggttcgatctggtgggctga
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integrated database retrieval system