Arthrobacter zhangbolii: MUK71_05415
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Entry
MUK71_05415 CDS
T08979
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
azh
Arthrobacter zhangbolii
Pathway
azh03030
DNA replication
azh03410
Base excision repair
azh03420
Nucleotide excision repair
azh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
azh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MUK71_05415 (ligA)
03410 Base excision repair
MUK71_05415 (ligA)
03420 Nucleotide excision repair
MUK71_05415 (ligA)
03430 Mismatch repair
MUK71_05415 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
azh03032
]
MUK71_05415 (ligA)
03400 DNA repair and recombination proteins [BR:
azh03400
]
MUK71_05415 (ligA)
Enzymes [BR:
azh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MUK71_05415 (ligA)
DNA replication proteins [BR:
azh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MUK71_05415 (ligA)
DNA repair and recombination proteins [BR:
azh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MUK71_05415 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MUK71_05415 (ligA)
MMR (mismatch excision repair)
DNA ligase
MUK71_05415 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MUK71_05415 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
BRCT_2
Nlig-Ia
Zn_ribbon_TFIIB
HHH_8
Motif
Other DBs
NCBI-ProteinID:
UON93064
UniProt:
A0A9X1SBL2
LinkDB
All DBs
Position
1165081..1167348
Genome browser
AA seq
755 aa
AA seq
DB search
MSTAKTSPEITDTEAAVESVSTDTPPAGDLREEYDALADQVRRYRFAYYNEDSPLVSDAE
FDRLYRRLEEIEALHPELVTNDSPTQEVGGEVSAAFAPVEHLQRMYSLEDVFSLDELEAW
VRKTEGSVANIAPGARIKWLTELKIDGLAVNLLYRNGELVRAATRGDGTTGEDITHNVLT
IASIPRTLKGENLPAEMEIRGEVFIPSKDFAHLNETMVEAGKAPFANPRNAAAGSLRQKD
PEVTARRPLSMYVHGIGAREGLDVASQSETYDLLQQWGLPTSPYYKVLDTYEEVLKYIAE
NGEHRHDLSHEIDGIVIKVDDFALQRALGNTSRVPRWSVAYKYPPEEVNTKLLDIRVNVG
RTGRVTPYGIMTPVLVSGSTVEMATLHNQDVVKAKGVKIGDTVVLRKAGDVIPEIVGPVV
ALRDGSERDFVMPTHCPSCGTELKPAKEGDVDIRCPNAKSCPSQLRERVFHLAGRGAFDI
EALGWEAAIALTSPAEPEKPPLTSEAGLFDLKIEDLADVRIERPKRVKGVVDGTELVPYF
YTKGTAKKPSVASANTRKLFEELEKAKSQPLWRVLVALSIRHVGPTAARALAGAFGSMEA
IRAATEEQLAHVDGVGPTIAAALTEWFAEDWHREIVDAWAAAGVRMADERDESMPRTLEG
LTVVVTGTLPNFSRDEAKEAILTRGGKASGSVSKKTDYVVAGENAGTKLEKAEALGVRVI
DEDGFRILLAEGSVPEDGAGTDGQNEEDKPEEGTE
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacagccaagacatccccggaaatcacggacactgaagcagccgttgaatcggtc
agcacggacaccccgcccgccggggacctgcgcgaggaatatgacgcgctcgcggaccag
gtgcgccgctaccgtttcgcctattacaacgaagactccccgctggtctccgacgctgag
ttcgaccggctctaccgccgcctggaagagatcgaggcgctgcacccggagctggtcacc
aacgattcacccacccaggaagtgggcggtgaagtctcggcggcctttgccccggtggaa
cacctgcagcggatgtacagcctggaggacgtcttctccctggatgagctggaggcatgg
gtccgcaagaccgaagggtccgtagccaacattgcccccggcgcccggatcaaatggctg
accgaactgaagatcgacgggcttgccgtgaacctgctctaccgcaacggcgaactggtc
cgcgccgccacccgcggcgacgggaccacgggggaggacatcacccacaatgtgctcacc
atcgcctccatcccgcgcacgctcaagggtgaaaacctgcctgcggaaatggaaatccgg
ggcgaggtattcatcccctcgaaggacttcgcgcacctgaacgaaaccatggtcgaggcg
ggcaaggcgcctttcgccaatccccgcaacgccgctgccggctccctgcggcagaaggac
cccgaagtcaccgccaggcgtccgctaagcatgtacgtgcacggcatcggtgcccgcgag
ggcctggacgtggccagccagtccgaaacctatgacctgcttcagcagtggggactgccg
acgtcgccctactacaaggtgctggacacttacgaagaggtcctgaagtacatcgcggag
aacggcgaacaccggcacgacctctcgcacgaaatcgacggcatcgtgatcaaggtggat
gactttgccctgcagcgtgccctgggcaacacgtcccgggtgccgcgctggtccgtggcg
tacaagtacccgccggaggaagtgaacaccaaactgctggatatccgggtgaacgtgggc
cggaccggccgcgtcaccccctacggcatcatgacacccgtgctggtctccggctccacc
gtggagatggccaccctgcacaaccaggacgtggtgaaggccaagggcgtcaagattggc
gacaccgtggtgctgcgcaaggccggcgacgtgattcccgaaattgtgggccccgtcgtc
gccctccgagacggcagcgaacgcgatttcgttatgcccacgcactgcccgtcctgcggc
accgagctgaagccggccaaggaaggggacgtggatatccgctgccccaacgccaaatcc
tgcccctcgcagctgcgtgaacgcgtgttccacctggccggccgcggtgccttcgacatt
gaggcgctgggctgggaggcagctattgccctcacctcacccgccgagccggaaaagccg
ccgctgacaagtgaggccggcctgttcgacctgaaaatcgaggacctggcggacgtccgg
attgaacggcccaagcgtgtcaagggcgtggtggacggcaccgaactcgttccgtacttc
tacaccaagggcaccgccaaaaagccgtccgttgcttccgccaatacccgcaagctgttc
gaggaactcgagaaagccaaatcccagccactgtggcgggtcctggtggcactgtccatc
cggcacgtgggcccgacggcggcccgtgccctcgccggcgccttcgggtcgatggaggcc
atccgtgctgccaccgaggagcagctggcgcatgtcgacggcgtcggccccaccatcgcc
gcggccctgacggaatggttcgccgaggactggcaccgcgagatcgtggatgcctgggca
gctgcaggggtccggatggccgacgaacgggacgagtccatgccccgcacactcgagggc
ctgaccgttgttgtcaccggcacattgcccaacttcagccgggacgaggccaaggaagcc
attctcacccgcgggggcaaggcctccgggtcggtatcgaaaaagaccgactacgtggtg
gccggggaaaatgcgggcaccaagctggagaaggccgaagccctgggcgtccgggtcatt
gacgaagacggcttccggatcctgctggccgaagggtccgtcccggaggacggggcagga
accgatgggcaaaacgaggaagacaaaccggaagaaggtaccgaatga
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