Nitrogeniibacter mangrovi: G3580_11110
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Entry
G3580_11110 CDS
T06549
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
azq
Nitrogeniibacter mangrovi
Pathway
azq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
azq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G3580_11110 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azq03400
]
G3580_11110 (nth)
Enzymes [BR:
azq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
G3580_11110 (nth)
DNA repair and recombination proteins [BR:
azq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G3580_11110 (nth)
Prokaryotic type
G3580_11110 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
Motif
Other DBs
NCBI-ProteinID:
QID19811
UniProt:
A0A6C1B7X9
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All DBs
Position
2408917..2409576
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AA seq
219 aa
AA seq
DB search
MSRAAIAQMFERFAQANPAPKTELAYATPFQLLVAVVLSAQATDKSVNLATRGLFAAAPT
PEAMITLGEEGIAEHIKTIGLFRNKARNVAALSRLLLERHGGEVPDTRDALVALPGVGRK
TANVVLNTIFRQPAMAVDTHIFRVANRTGLAAGKNVDEVEQRLLKRIPKDYLLDAHHWLI
LHGRYVCTARKPRCGDCLVRDLCNFRDKTDVPADAAFEG
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgcggccatcgcgcagatgttcgaacgctttgcccaggccaacccggcgccc
aagaccgagctggcgtacgcgaccccgttccagttgctggtagcggtggtcctgtccgcc
caagccaccgacaagagcgtaaacctcgccacgcgcggtctgttcgccgccgccccgacc
ccggaggccatgatcaccctgggcgaggaaggcatcgccgaacacatcaagaccatcggc
ctgttccgcaacaaggccaggaacgtcgccgccctctcgcgcctgctgctcgaacgccat
ggcggcgaggtgcccgacacccgcgacgccctggtcgccctgcccggcgtggggcgcaag
accgccaacgtggtgctcaacaccatctttcgccaacccgccatggcggtcgacacccac
atcttccgggtcgccaaccgcaccggcctggcggccggcaagaacgtggacgaggtcgag
cagcgcctgctcaagcgaatccccaaggactacctcctcgacgcccaccactggctgatc
ctgcatggccgctacgtgtgcaccgcgcgcaaaccgcgctgcggcgactgcctggtgcgc
gacctgtgcaacttccgtgacaagaccgacgtccccgccgacgccgccttcgaaggctga
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