Azoarcus sp. DD4: CJ010_13020 Help Entry CJ010_13020       CDS       T06048                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism azr  Azoarcus sp. DD4 Pathway azr03030   DNA replication azr03410   Base excision repair azr03420   Nucleotide excision repair azr03430   Mismatch repair Brite KEGG Orthology (KO) [BR:azr00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     CJ010_13020    03410 Base excision repair     CJ010_13020    03420 Nucleotide excision repair     CJ010_13020    03430 Mismatch repair     CJ010_13020  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:azr03032]     CJ010_13020    03400 DNA repair and recombination proteins [BR:azr03400]     CJ010_13020 Enzymes [BR:azr01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      CJ010_13020 DNA replication proteins [BR:azr03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      CJ010_13020 DNA repair and recombination proteins [BR:azr03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      CJ010_13020    NER (nucleotide excision repair)     GGR (global genome repair) factors      CJ010_13020    MMR (mismatch excision repair)     DNA ligase      CJ010_13020   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       CJ010_13020 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD Nlig-Ia HHH BRCT_2 PTCB-BRCT HHH_3 5_3_exonuc Motif Other DBs NCBI-ProteinID:  QDF97386 UniProt:  A0A4Y6KTP0 LinkDB All DBs Position complement(2839507..2841552) Genome browser AA seq 681 aa AA seqDB search MPLLSAAADRAAFLRAEIERHNHAYYVLDAPTVPDAEYDRLYRELEALEAAHPELRTADS PTQRVGGAPLPGLAAVRHAVPMLSIRTETDTTEQGVHNFDTRVRNALGLGPADPPVEYLG ELKFDGLAISLRYEHGLLVRAATRGDGETGEDVTHNVRTIRQIPLRLAGMAPALIEIRGE IYMRRDDFDALNARQREAGEKVFVNPRNAAAGAVRQLDSRIAARRPLSFFAYGLGEHAGF VLPATQADLLERFADFGVPVCEHRSVSSGVDGLIAFHARIAALRNALPYDIDGVVYKVNR ADLQRELGFVTREPRWAVAHKYPAQEEITRLLDIGVQVGRTGALTPVARLEPVFVGGVTV TNATLHNQDEIDRKDVRVGDWVIVRRAGDVIPEVVGPVLERREGELLRFDLLASYPTCPV CGSHVVRGEDEAVARCTGGLFCPAQRKQALLHFACRRAMDIEGLGDKLVDQLVDASIVKT PADLYKLGILALANLERMGEKSAQNLLAAIEKSRNTTLARFIFALGIRNVGEATAKELAR HFGSLDALLTADVAALQQVPDIGPIVAESIADFFAEPHNVEVVEQLRAAGLRWEEGAPAA PVSGKASGKTFVLTGTLPTMSRDEAKALIEAHGGKVSGSVSKKTDYVVAGAEAGSKLIKA QDLGVDILDEDGLRRLLESGD NT seq 2046 nt NT seq  +upstreamnt  +downstreamnt atgccattgctttccgccgccgccgaccgggcggcgtttctgcgcgccgagatcgagcgc cacaaccatgcctattacgtactcgacgcgccgacggtgccggatgcggagtacgaccgt ctttaccgcgagctcgaagcgctcgaagccgcgcatccggaactccgcaccgccgactcc cccacccagcgtgtcggtggtgcgccgctaccgggattggcggcggtgcgccacgcggtg ccgatgctctccatccgtaccgagaccgatacaaccgagcagggcgtgcacaacttcgac acccgggtgcgtaacgcgctcggcctcggaccggcagatccgccggtggagtacctcgga gaactcaagttcgacggcctcgcgatcagcctgcgctacgagcacggcttgctggtgcgc gccgcgactcgcggcgacggcgaaaccggcgaagatgtcacccacaacgtgcgcaccatc cgccagattccgctgcggctggcgggtatggcaccggcgctgatcgaaatccgcggcgag atctacatgcggcgcgacgacttcgatgcgctcaatgcgcgtcagcgcgaagcgggagaa aaggtcttcgtcaatccgcgcaacgccgcggcaggtgcggtgcgccagctcgattccagg attgcagcgcgccggccgctgtccttcttcgcatatgggctgggcgaacacgccggcttc gtgctgccggccactcaggccgatctgcttgaacgctttgccgacttcggcgttccggtg tgcgagcaccgcagcgtatcgagcggcgtggacgggctcatagcgttccacgcccgcatc gctgcgctgcgcaatgctctgccctacgatatcgatggggtggtctacaaggtcaaccgg gccgacctgcagcgcgaacttggtttcgtcacccgcgaaccgcgctgggcggtcgcccac aagtacccggcgcaggaagagatcacccgcctgctcgacatcggcgtgcaggtcgggcgc actggcgcgctgacgccggtggcgcggctggagccggtattcgtgggcggcgtcaccgtc accaacgccaccctgcacaaccaggacgagatcgaccgcaaggacgtacgtgtcggcgac tgggtgatcgtgcgcagggcaggggacgtgatacccgaggtggtcgggccggtgctggag cgccgtgaaggcgagctgctgcgcttcgacctgctggccagctatccgacctgcccggtc tgcggctcgcacgtcgtgcgcggcgaggacgaggcggtggcgcgctgcaccggcggcttg ttctgcccggcccagcgcaaacaggcattgctgcactttgcctgccgccgcgcgatggat atcgaaggtctgggtgacaagctggtggatcagctggtcgatgccagtatcgtcaagacg ccggccgacctctacaagctcggcatcctcgcactggccaaccttgagcgcatgggcgaa aagtcggcgcagaacctgctggcggcgatcgagaaaagccgtaataccacgctggcacgc ttcatctttgcacttggcatacgcaatgtcggcgaggcgacggccaaggagctcgcgcgc catttcggcagcctggatgccttgctgactgcggacgtggcagcgctgcagcaggtgccg gatattggccccatcgtggccgagagcatcgccgacttcttcgccgagccgcacaacgtc gaggtggtcgagcagttgcgcgcggctggcctgcgctgggaagagggtgctcctgccgcg ccggtctcgggcaaggctagcggcaagaccttcgtgctgaccggtacgctgccgacgatg tcgcgcgacgaggccaaggcattgatcgaggcgcatggcggcaaggtcagcggttcggta tcgaagaagacggattacgtggtggcaggcgccgaggccggctccaagctcatcaaggcg caggatctcggcgtagacatcctcgacgaggacggtctgcgccgtttgctggaatcgggc gactga

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