Azospirillum sp. TSH58: TSH58p_14350
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Entry
TSH58p_14350 CDS
T05449
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
azt
Azospirillum sp. TSH58
Pathway
azt00300
Lysine biosynthesis
azt00550
Peptidoglycan biosynthesis
azt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
azt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TSH58p_14350
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TSH58p_14350
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
azt01011
]
TSH58p_14350
Enzymes [BR:
azt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
TSH58p_14350
Peptidoglycan biosynthesis and degradation proteins [BR:
azt01011
]
Precursor biosynthesis
Amino acid ligase
TSH58p_14350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
RraA-like
Motif
Other DBs
NCBI-ProteinID:
AWJ85378
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Position
complement(2319228..2320661)
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AA seq
477 aa
AA seq
DB search
MGGPAVEVPAITVTGLTADSRAVRPGFVFAALPGAKVDGRAFIADALAKGAVAVVAPVGT
VLPAGSAAILVADEQPRRLFARLAAAFHGRHPDTVVAVTGTNGKTSTVQFARQMWDLMGL
KAASLGTLGLIGPGLDDYGGMTTPDPVSLHRDLAAVKDKGIEHLAMEASSHGLEQFRLDG
VVLKAAGFTNLTRDHLDYHGTMEAYLQAKAMLFGRVLPDGGTAVLNADSGTFAELAGICS
QRGHRVFGYGLAGREIRVNGVEPLAHGQRLDLTVLGRDLTVDLPLAGRFQAWNVLCALGL
VIGSGADRDEALATLTRLEGVPGRLQHVATHPCGAAVYVDFAHTPDALETVLLALKQHAR
NRLIAVFGCGGDRDRGKRPVMGELAGRLADRAIVTDDNPRTEVPAAIRKEVLAGHPALEE
IGDRREAIRAAVRSLQPGDVLVVAGKGHEHGQIVGTEVLPFDDATEARAAVAEVGAA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atcggggggcctgccgtcgaggtgccggccatcactgtgaccgggttgaccgcggacagc
cgcgcggtcaggcccggtttcgtctttgccgccctgccgggcgcgaaggtggacgggcgc
gccttcatcgccgacgcgctcgccaagggcgccgtcgcggtggtggcgccggtcgggacc
gtcctgcccgccggcagcgccgcgatcctggtggcggacgagcagccgcgccgtctcttc
gcgcgcctcgccgccgccttccacgggcggcatccggacaccgtcgtcgccgtgacgggc
accaacggcaagacctccaccgtccagttcgcccgccagatgtgggacctgatgggcctg
aaggcggccagcctgggcacgctcgggctgatcgggccggggctggacgattacggcggg
atgaccaccccggacccggtgtcgctccaccgcgacctcgccgccgtcaaggacaagggg
atcgagcatctggcgatggaggcgtccagccacgggctggagcagttccgactcgacggg
gtggtcctcaaggccgccggcttcaccaacctgacccgcgaccatctggactaccacggc
acgatggaggcctacctccaggccaaggcgatgctgttcggacgggtgttgcccgatggg
ggaaccgccgtcctgaacgccgacagcggcacattcgccgagcttgccgggatttgttca
cagcgcggtcaccgcgtcttcggatacggtctggccggtcgcgagatccgggtcaacggg
gtcgagccgctggcccacggccagcgcctggacctgacggtcctgggccgcgatctcacc
gtggacctgccgctggcgggccgcttccaggcgtggaacgtgctgtgcgcgctcggcctg
gtgatcggctccggcgcggaccgtgacgaggctctcgccaccctgacccgccttgagggc
gtgccggggcgcctgcagcacgtcgccacccacccctgcggggcggcggtctatgtcgat
ttcgcccacacgcccgacgcgctggaaacggtgctgctggcgctgaagcagcacgcccgg
aaccgcctgatcgcggtgttcgggtgcggcggcgaccgcgaccgcgggaagcggccggtg
atgggggagctggccggccgtctggccgaccgcgccatcgtcaccgacgacaacccgcgc
accgaggtgccggcggccatccgcaaggaggtcctggcgggccatccggccctggaggag
atcggcgaccggcgcgaggccatccgcgccgccgtccgcagccttcagcccggtgacgtc
ctggtcgtcgccggcaagggacatgagcatggtcagatcgtcgggacggaggtccttccc
ttcgacgacgcgaccgaggcacgagccgccgtggcggaggttggagcagcatga
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