Bacillus sp. ABP14: BGI23_01775
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Entry
BGI23_01775 CDS
T11093
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
baap Bacillus sp. ABP14
Pathway
baap03030
DNA replication
baap03410
Base excision repair
baap03420
Nucleotide excision repair
baap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
baap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BGI23_01775 (ligA)
03410 Base excision repair
BGI23_01775 (ligA)
03420 Nucleotide excision repair
BGI23_01775 (ligA)
03430 Mismatch repair
BGI23_01775 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
baap03032
]
BGI23_01775 (ligA)
03400 DNA repair and recombination proteins [BR:
baap03400
]
BGI23_01775 (ligA)
Enzymes [BR:
baap01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BGI23_01775 (ligA)
DNA replication proteins [BR:
baap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BGI23_01775 (ligA)
DNA repair and recombination proteins [BR:
baap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BGI23_01775 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BGI23_01775 (ligA)
MMR (mismatch excision repair)
DNA ligase
BGI23_01775 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BGI23_01775 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
RNA_pol_A_CTD
Nlig-Ia
HHH
PTCB-BRCT
RNA_ligase
BRCT_2
HHH_3
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AOY13942
LinkDB
All DBs
Position
325438..327447
Genome browser
AA seq
669 aa
AA seq
DB search
MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP
SVRVGGTVLDIFEKVTHKSPMLSLGNAFNEGDLRDFDRRVRQGIDDANVRYICELKIDGL
AVSLHYEKGRFIQGATRGDGVTGEDITQNLKTIKAIPLRLNEEVTLEARGEAYMPKRSFV
KLNEEKEQNGEDVFANPRNAAAGSIRQLDPKIAAKRNLSMFVYGLANVEEKTILSHSESL
DFLGELGFKTNPNRRTCETIEEVIAYVEEWQEKRPHLDYEIDGIVIKVDDVALQESLGTT
AKSPRWAIAYKFPAEEVVTRLTGIELSVGRTGVVTPTAELEPVRVAGTIVRRASLHNEDL
IREKDIRIGDYVVVKKAGDIIPEVVNVIFDKRTGEEEEYHMPTHCPACESELVRLEEEVA
LRCINPTCPAQIREGLIHFVSRNAMNIDGLGERVITQLFEADYIRTFADLYSLTKEQLLQ
LERFGEKSATNLVQAIENSKENSLERLLFGLGIRHVGAKAARTFAEHFETMDALVKATEE
ELKAINEIGEKMAQSVVTYFDNEDVLELLQQFKEYGVNMTYKGMKIADLQNVESYFAGKT
VVLTGKLEVMGRSEAKKKIEALGGKVTGSVSKSTDLVVAGEAAGSKLAQAEKHNVEVWNE
ERFLQELNK
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagagatagcaaaaaaacgtatagaagaactacgtgatttgttaaatacattt
aactatcaatatcacgtgttagacaatccttctgtttctgatgcggagtatgaccgtaat
atgcaggagcttataaaattagaagcagagaacccagagtttatgagtgaagattctccc
tccgttcgcgttgggggaacggttcttgatatatttgaaaaagtaacacacaagtcaccg
atgttaagtttgggaaatgcatttaacgaaggagatttacgtgattttgaccgacgagta
cgtcaaggaattgatgatgcgaatgtaagatatatatgcgaattaaaaattgacggactt
gctgtttcacttcattatgaaaaaggacgcttcattcaaggggcaacacgtggtgatggt
gtaacaggtgaagatattacccaaaatttaaaaacgattaaagcaatcccgcttcgttta
aatgaagaagtaacgttagaggcacgaggcgaagcttatatgccgaagcgttcattcgtt
aagttaaatgaagaaaaagagcaaaatggtgaagatgtatttgcgaatccgcgtaatgcg
gcagcaggttcaatccgccaacttgatccgaaaattgcagcgaagcgtaacttatctatg
tttgtatacggtcttgcgaatgtagaagaaaaaacaatcctatcacatagtgaatcgctt
gatttcttaggtgaacttggattcaaaacaaatccaaatcgacgcacatgtgaaacaatt
gaagaagttatagcttatgtagaagaatggcaagaaaaacgtccgcatcttgattatgag
attgacgggatcgttataaaagtagatgatgttgctcttcaagaaagtctaggcactaca
gcaaagagtccaagatgggcaattgcttataaattcccagctgaagaagttgtaacaaga
ttaacaggcattgaattaagtgttggtcgtacaggggttgtaacaccgactgcagagcta
gagccagtgcgagtggctggtacgatcgttcgtcgtgcttctttacataacgaagattta
attcgtgaaaaagatattcgaattggtgactacgttgttgtgaagaaggctggagatatt
attcctgaagttgtgaatgttattttcgataagcgtactggtgaggaagaagaatatcat
atgccaacgcattgcccagcatgtgagagtgaactagttcgtttagaagaagaggtagca
cttcgttgtataaatccaacttgtcctgctcaaattcgagaagggttaatccatttcgtt
tcaagaaatgcaatgaatattgatggacttggagaacgtgtcattacacaactctttgag
gcagattatattcgtacatttgctgatttatattcgttgacgaaagagcaattattacag
ctagaacgatttggagaaaaatcagcaacgaatttagtacaagcaattgagaattctaaa
gaaaactcattagagcgattattattcggtcttggtattcgccatgttggagcgaaagcg
gcacgtacatttgcagagcatttcgaaacgatggatgcgcttgtgaaggcaacggaagaa
gaactaaaagcaattaatgaaattggtgaaaaaatggctcaatccgtagtaacgtatttc
gataatgaagacgtattagagttattacaacaatttaaagaatacggcgtgaacatgaca
tataaaggcatgaaaattgctgatttacaaaacgttgagtcgtacttcgcaggaaaaact
gtcgttttaacagggaaattagaagtgatgggacgtagtgaagcgaagaagaagattgag
gcattaggtggaaaagtaacaggaagtgttagtaaaagtacagatttagttgttgcaggt
gaagcggcaggttcgaaattagcacaagcggagaaacataatgttgaggtttggaatgaa
gagaggttcttacaagagctaaataagtaa
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