Bacillus sp. BH072: OY17_06150
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Entry
OY17_06150 CDS
T03582
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bacb
Bacillus sp. BH072
Pathway
bacb03030
DNA replication
bacb03410
Base excision repair
bacb03420
Nucleotide excision repair
bacb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bacb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OY17_06150 (ligA)
03410 Base excision repair
OY17_06150 (ligA)
03420 Nucleotide excision repair
OY17_06150 (ligA)
03430 Mismatch repair
OY17_06150 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bacb03032
]
OY17_06150 (ligA)
03400 DNA repair and recombination proteins [BR:
bacb03400
]
OY17_06150 (ligA)
Enzymes [BR:
bacb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
OY17_06150 (ligA)
DNA replication proteins [BR:
bacb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OY17_06150 (ligA)
DNA repair and recombination proteins [BR:
bacb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
OY17_06150 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OY17_06150 (ligA)
MMR (mismatch excision repair)
DNA ligase
OY17_06150 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
OY17_06150 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
HHH
Nlig-Ia
PTCB-BRCT
BRCT_2
5_3_exonuc
HHH_8
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AJE77700
LinkDB
All DBs
Position
1226163..1228169
Genome browser
AA seq
668 aa
AA seq
DB search
MDKETAKHRAEELRRTIDQYSYEYYTLDEPSVPDSEYDRLMQELIAIEEEHPELRTPDSP
TQRVGGAVLESFQKVQHGTPMLSLGNAFNDDDLRDFDRRVRQAVGDGVAYNVELKIDGLA
VSLRYEDGYFVRGATRGDGTTGEDITENLKTIRNIPLKMKRNLSIEVRGEAYMPKQSFEA
LNEDRLKHEEEPFANPRNAAAGSLRQLDPKIAAKRNLDIFVYSIAELDEMGVETQSQGLD
FLDELGFKTNQERKKCATIDEVIEMIEELQAKRADLPYEIDGIVIKVDSLDQQEELGYTA
KSPRWAIAYKFPAEEVVTKLLDIELNVGRTGVITPTAVLEPVKVAGTTVSRASLHNEDLI
KEKDIRILDKVVVKKAGDIIPEVVNVLIEQRTGEEKEFNMPTSCPECESELVRIEGEVAL
RCINPECPAQIREGLIHFVSRNAMNIDGLGERVITQLFREHLVRNVADLYKLTKEQVIRL
ERMGEKSTDNLISSIQKSKENSLERLLFGLGIRFIGSKAAKTLAMHFESLENLKQATEEE
LLAVDEIGEKMADAVVTYFRKEEMVELLNELEELGVNTLYKGPKKVKAEDSDSYFAGKTI
VLTGKLEELSRNEAKAQIEALGGKLTGSVSKKTDLLIAGEAAGSKLTKAQELNIEVWNEA
QLLGELKK
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagaaacagcgaaacaccgggcagaagaattgcgccgcaccatcgatcagtac
agttatgaatattacaccttagatgaaccgagcgtgccggattccgagtacgacagactg
atgcaggagctgattgccatagaggaagagcacccggagctcagaacgcctgattcgccc
acacagcgggtcgggggagcggtgcttgaatcgtttcaaaaggtgcagcacggcacgccg
atgctcagtctcggcaacgcatttaacgatgatgatctccgcgattttgaccgccgcgtc
cgtcaggctgtcggtgacggcgtcgcttataatgtggagctgaaaatagacggtcttgct
gtttctctccgttatgaagacggctatttcgtcagaggcgcgacaagaggagacggaacg
acgggcgaagatatcacggaaaacttaaaaacgatccgcaacattccgctgaaaatgaaa
cggaatctttccatagaagtgcgcggagaggcgtacatgccgaaacagtcatttgaagcg
ctcaatgaagataggctgaaacatgaagaggagccgttcgccaatccccggaacgcggct
gcgggctcactcagacagctcgatccgaaaattgcagcgaaacgaaatcttgacatcttc
gtctacagtatagcggagcttgacgaaatgggtgtggaaacacagagtcagggcctggat
tttctggatgagctcggttttaaaacaaaccaggaacggaaaaaatgcgccacgatagat
gaagtcattgaaatgatcgaagagctgcaggcgaagcgggccgatctcccgtatgaaatt
gacggaatcgtcatcaaagtcgattcgctcgaccagcaggaagagctcgggtatacggca
aaaagcccgcgctgggcgattgcttataaattcccggcggaagaggtcgtgacaaaactt
ctcgatatcgaactgaatgtcggaagaacgggcgtcattacgccgaccgccgttctggaa
ccggtaaaagtcgcgggaacgacggtctcaagagcatcccttcataacgaagatttaatt
aaagagaaggatatccgcattctcgataaagtggtcgtcaaaaaagcgggcgacatcatc
cctgaggtcgtcaatgtcttaatcgaacagcggaccggggaagaaaaagaattcaatatg
cctaccagctgccctgagtgcgagagcgaacttgtccgcattgaaggggaagtcgcgctg
cgctgcatcaatccggaatgtccggcgcagatcagagaaggcctgattcactttgtctca
cgcaacgcgatgaatattgacggactcggagaacgtgtcatcacacagcttttccgtgaa
catctcgtccgtaatgtcgctgatttgtataagctgacgaaagagcaggtcatccggctt
gagcggatgggggaaaaatcaactgacaatctgatcagctccatccaaaagtcgaaagag
aattcgctggaacgcctgctgttcggtctcggcatccgttttatcggctcaaaagcggcc
aaaacactcgccatgcattttgaaagcctggaaaatctgaaacaagccacggaagaagag
ctgcttgcggtagatgaaatcggcgaaaagatggccgatgccgttgtcacctatttccgt
aaagaagaaatggttgagctattgaatgaacttgaggaactcggtgtgaacacactctac
aaaggcccgaaaaaagtaaaagcggaggacagcgactcttattttgccggcaaaaccatc
gtgttaaccggaaagcttgaagagctgtccagaaatgaagccaaggcgcagattgaagcg
ctcggcggaaagctgacgggatctgtcagcaaaaaaacagacttgctgattgccggagaa
gcggccggaagcaagctgacaaaagcgcaggaattaaacattgaagtatggaatgaagca
cagctattgggagagctaaagaaataa
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