Bacteroides sp. CACC 737: H1A11_16410
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Entry
H1A11_16410 CDS
T10488
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
bace Bacteroides sp. CACC 737
Pathway
bace01501
beta-Lactam resistance
bace01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
bace00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H1A11_16410
01503 Cationic antimicrobial peptide (CAMP) resistance
H1A11_16410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bace03036
]
H1A11_16410
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bace02000
]
H1A11_16410
01504 Antimicrobial resistance genes [BR:
bace01504
]
H1A11_16410
Chromosome and associated proteins [BR:
bace03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
H1A11_16410
Transporters [BR:
bace02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
H1A11_16410
Antimicrobial resistance genes [BR:
bace01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H1A11_16410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
YknX_C
Beta-barrel_RND
BSH_CusB
BSH_CzcB
CzcB_C
Biotin_lipoyl
HH_MFP_RND
HH_EMRA
BSH_YknX
MscS_porin
HH_AAEA_pHBA
HH_AprE
BSH_YhbJ
Beta-barrel_RND_2
DUF433
HH_CzcB
PDZ_Tricorn
BSH_LcnD
Por_Secre_tail
Motif
Other DBs
NCBI-ProteinID:
QMI80000
LinkDB
All DBs
Position
complement(3962076..3963251)
Genome browser
AA seq
391 aa
AA seq
DB search
MKSRLVLLACCLALLSSCGQGDKGTGKAPEFAVIEAKTTTANLTNSYPATIKGKQDVEIR
PMVSGFITKLHVDEGATVRKGQVLFSIDPVQYQAAVNSAKAAVETAKAAVNTQELTVNNK
RELNKKNIISDYDLQMAENQLAQTKAQLAQANAQLVNAKNNLSYTSVTSPSDGVVGSIPY
RVGSLVSPSVASPLTTVADISEMYAYFSMTERQLLSQIREGGSIKEILEKMPDVQLQLID
GTMYADSGRVETISGVIDQTTGSVTMRALFPNKHNVLRSGSTGNVVFPNPLHDVIMIPQA
ATTEIQDKQFVFVLQPDNTLKNTEVKVFSLDDGKYYYVTEGLKAGDKIVIEGVQNLKDGQ
SITPITPAEKEAEYQKALKDQKEGNIQTAFN
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtagattagtattattggcatgttgcctggcactgctcagcagttgcggacaa
ggcgacaaaggaacgggtaaagctcccgaatttgcagtgattgaggcaaaaaccaccact
gccaacttgacaaacagctaccctgctactatcaagggtaaacaagatgtagaaattcgc
ccgatggtgagcggtttcatcacaaaattgcacgtcgacgaaggcgcaacagtacgcaaa
ggacaagtgttgttcagcatcgaccccgtacagtatcaggcagccgtaaattcggccaaa
gctgctgttgaaacagccaaagctgccgtaaacacacaagaactgactgtaaacaacaaa
cgtgaactgaacaagaaaaacatcatcagtgactacgatttgcaaatggccgaaaaccaa
ctggcacagacaaaggcgcaactagcacaagccaatgcccaattggtcaatgccaagaac
aacttgtcatacactagtgtaaccagccccagtgacggtgtagtaggtagcattccctac
cgcgtaggtagcctagttagtccttccgtagccagcccgctgactaccgttgccgacatc
tccgaaatgtacgcctatttctccatgaccgaacgccaacttttgtcacaaattcgtgaa
ggcggcagcatcaaggaaattctggaaaagatgccggatgtacagttgcagctcatcgac
ggaaccatgtatgccgacagtggccgcgtggagacaatcagcggagtcattgatcaaact
accggttcggtaaccatgcgtgccctcttccccaacaagcacaacgtgttgcgtagcgga
agcaccggcaatgtggtattccccaaccctttgcatgatgtcatcatgattccacaggcc
gccactaccgaaatccaggacaagcagttcgttttcgttctgcaaccggacaatacgttg
aaaaataccgaagtcaaagtgttcagcttagacgatggcaagtattattacgtgacggaa
ggtttgaaagcaggcgataaaatcgttatcgaaggggtacagaacctgaaggacggacaa
tccatcacacctattacgcctgctgaaaaggaagccgaataccagaaggccttgaaagac
cagaaagaaggtaacattcaaacggcattcaattaa
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