Bacillus sp. H15-1: BSZ43_03635
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Entry
BSZ43_03635 CDS
T11355
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bach Bacillus sp. H15-1
Pathway
bach03030
DNA replication
bach03410
Base excision repair
bach03420
Nucleotide excision repair
bach03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bach00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSZ43_03635 (ligA)
03410 Base excision repair
BSZ43_03635 (ligA)
03420 Nucleotide excision repair
BSZ43_03635 (ligA)
03430 Mismatch repair
BSZ43_03635 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bach03032
]
BSZ43_03635 (ligA)
03400 DNA repair and recombination proteins [BR:
bach03400
]
BSZ43_03635 (ligA)
Enzymes [BR:
bach01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BSZ43_03635 (ligA)
DNA replication proteins [BR:
bach03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BSZ43_03635 (ligA)
DNA repair and recombination proteins [BR:
bach03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BSZ43_03635 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BSZ43_03635 (ligA)
MMR (mismatch excision repair)
DNA ligase
BSZ43_03635 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BSZ43_03635 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
APJ25956
LinkDB
All DBs
Position
720722..722725
Genome browser
AA seq
667 aa
AA seq
DB search
MEKEAAKRRVEQLHALINKYNYEYHTLDDPSVPDSEYDKLMKELIALEEEHPDLKTPDSP
SQRVGGAVLDAFQKVQHKTPMLSLGNAFNEEDLRDFDRRVRQAVGDVEYNVEFKIDGLAV
SLRYENGVFVRGATRGDGTTGEDITENLKTIRNIPLRMKRDLSIEVRGEAFMPKRSFELL
NKARIERDEEPFANPRNAAAGSLRQLDPKIAAKRNLDIFVYSIAELDEMGVETQSQGLDF
LDELGFKTNHERKKCSTIEEVIEIVEELKTKRADLPYEIDGIVIKVDSLDQQEELGFTAK
SPRWAIAYKFPAEEVVTTLLDIELSVGRTGAVTPTAILEPVKVAGTTVQRASLHNEDLIK
EKDIRLLDKVVVKKAGDIIPEVVNVLVEQRTGKEKEFNMPKECPECGSELVRIEGEVALR
CINPECPAQIREGLIHFVSRNAMNIDGLGERVITQLFREDLVHNVADLYKLTREQLINLE
RMGEKSTDNLLNSIEKSKKNSLERLLFGLGIRFIGAKAAKTLAMHFETLDKLKKATKEEL
IEVDEIGDKMADALVTYFEKEEILKLLDELEELGVNTVYKGPKKAAAEASDSYFAGKTIV
LTGKLSEMSRNDAKAEIEALGGKITGSVSKKTDLVIAGEAAGSKLAKAEDLNIEVWDEAR
LISELKK
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaagcagctaaacgccgtgtggaacaactgcatgcattgattaacaaatac
aactacgaatatcacacccttgacgatccaagcgtgcctgattccgaatatgacaagctg
atgaaagagctgattgctcttgaagaagagcatcccgacctgaaaacgccggactctcct
tctcagcgcgtcggcggagccgttttggacgcctttcaaaaagtgcagcacaaaacgccg
atgctgagcctcggcaacgcgtttaatgaagaagatctgcgcgactttgaccgccgcgtc
cgccaggcggtcggagacgttgaatacaacgtcgagtttaaaatagacggtcttgctgtt
tcactgcgctatgaaaacggcgtatttgtcagaggtgcgacgagaggcgacggtacgacg
ggcgaggatattacggaaaatttgaaaaccatcagaaacattcccctcagaatgaaacgc
gatctttctattgaagtgcgcggcgaagcttttatgccgaagcgctcctttgaactgctg
aacaaagcgcggatcgaacgtgatgaagagccgttcgccaacccgcggaacgccgctgcc
ggttcattaaggcagctcgatccgaaaattgccgcgaaacgaaatctcgatatcttcgtc
tacagtatagcggagcttgatgaaatgggcgttgaaacgcaaagccagggactcgatttc
ctcgacgaactcggcttcaaaaccaatcatgaaagaaaaaaatgcagcacgatcgaagaa
gtcattgagattgtcgaagagctcaagacaaaacgcgccgacctcccgtatgaaatcgac
gggatcgtcattaaagtcgattcccttgaccagcaggaagagctcggctttacggcgaaa
agcccgcgctgggcgatcgcctacaagtttcctgccgaagaggttgttacgacgcttttg
gacattgaattaagcgtcggccggacgggcgcagtgaccccgactgcgattctcgaacct
gtaaaagtggcgggaacgaccgtccaaagagcttctctccacaacgaagatttaattaaa
gagaaggatatcagactgctggacaaagtcgtcgtcaaaaaggcgggagacatcattccg
gaggtcgtcaacgtcctcgtcgaacagcggacgggcaaagaaaaagaattcaacatgccg
aaggaatgcccggaatgcggaagcgagcttgtcagaatcgaaggagaagtcgcgcttcgc
tgcattaatccggaatgtccggctcagatcagggaaggcctgatccattttgtttcccgg
aatgcgatgaatatagatggtctcggcgagcgcgtcatcacccagctgttccgcgaagac
ctcgtccataatgtcgccgatctgtataagctgacgcgcgagcagctgatcaatctcgag
cggatgggggaaaagtcgaccgacaacttattgaattcgattgaaaaatcgaagaagaac
tcattggaacggcttctcttcggactcggcatccgcttcatcggcgccaaagcggccaag
acgctggcgatgcattttgaaacgctcgataagcttaaaaaagcgacaaaagaagaattg
atcgaagtcgatgaaatcggcgacaagatggcggacgccctcgtcacctattttgaaaaa
gaagagattctgaagctgttggacgagcttgaagaactcggggtcaacaccgtgtataaa
ggcccgaaaaaagcggccgctgaagcgagcgattcgtattttgcggggaaaacgatcgtc
ctgaccgggaagctcagcgagatgtcgcggaatgacgcgaaagcggaaatcgaagcgctc
ggcggaaaaatcacaggcagtgtaagcaaaaaaaccgatctcgtcattgccggcgaagcg
gcaggcagcaaactggcgaaagctgaagacctaaacatcgaagtatgggatgaggcaaga
ctgatcagtgagctaaagaaataa
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