Bacillus sp. 1NLA3E: B1NLA3E_01630
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Entry
B1NLA3E_01630 CDS
T02643
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
baci
Bacillus sp. 1NLA3E
Pathway
baci03030
DNA replication
baci03410
Base excision repair
baci03420
Nucleotide excision repair
baci03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
baci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B1NLA3E_01630 (ligA)
03410 Base excision repair
B1NLA3E_01630 (ligA)
03420 Nucleotide excision repair
B1NLA3E_01630 (ligA)
03430 Mismatch repair
B1NLA3E_01630 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
baci03032
]
B1NLA3E_01630 (ligA)
03400 DNA repair and recombination proteins [BR:
baci03400
]
B1NLA3E_01630 (ligA)
Enzymes [BR:
baci01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
B1NLA3E_01630 (ligA)
DNA replication proteins [BR:
baci03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
B1NLA3E_01630 (ligA)
DNA repair and recombination proteins [BR:
baci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
B1NLA3E_01630 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B1NLA3E_01630 (ligA)
MMR (mismatch excision repair)
DNA ligase
B1NLA3E_01630 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B1NLA3E_01630 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH
5_3_exonuc
RNA_pol_A_CTD
BRCT_2
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AGK52110
UniProt:
N0AVQ8
LinkDB
All DBs
Position
364805..366811
Genome browser
AA seq
668 aa
AA seq
DB search
MDLQTQKNRVRELHELLNQYNYEYYVLDHPSVPDAEYDRLIKELIGIETQYPDLKTADSP
SQRVGGEVLDVFEKVEHRVPMLSLGNAFGPQDLRDFDRRIRQVVGDDFSYICELKIDGLA
VSLRYDNGVFIQGATRGDGTVGEDITANLKTIGSMPLRLSEEIAIEVRGEAFMPKRSFEA
LNKVKNEKGEEPFANPRNAAAGSLRQLDPKIASSRALDIFLYGIAGAENANITSHSEGLS
WLDSLGFKTNKERQNCADIDSVIQFVESWVEKRPNLPYEIDGIVIKVDSLRQQEILGTTA
KSPRWAIAYKFPAEEVVTTLIDIELNVGRTGVITPTAILEPVRVAGSTVGRASLHNEDLI
REKDIRLGDQVVVKKAGDIIPEVVNVLVERRTGEEKVFQMPTSCPECESELVRLEEEVAL
RCINPKCPAQIREGLIHFVSRNAMNIEGLGEKVISQLFSESLIHDVADIYKLTREQLIGL
ERMGEKSIQNLLAAIDGSKENSLEKLLFGLGIRHVGAKAAKTLAQHFETIDCLAEATEVE
LTAVNEIGEKMASSIVTYFAKDEVNELIQELKLASVNMVYKGPKRVLAEDSNSFFNGKTV
VLTGKLEHLNRNEAKEKIEALGGNVAGSVSKKTNLVIAGADAGSKLTKAEELGIEIWDEV
KMIEELNK
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaccttcaaactcaaaaaaatcgtgtaagggaattgcatgaattacttaatcaatat
aattacgaatattatgttctagatcatccaagtgtaccggatgccgaatacgaccgactt
attaaggaattgattgggattgaaacccaatatccagatcttaaaacggcggattctcct
tcacaaagagtgggcggagaagtgttagatgtatttgagaaggttgagcatcgggttccg
atgttaagcctaggaaatgcctttggcccacaagatttacgcgactttgaccggagaatt
cggcaggttgttggcgatgatttttcgtatatttgtgagttgaaaattgatgggttagcg
gtatctcttcgttatgataatggtgtttttatccaaggggcaacaagaggagacggaact
gttggtgaggacatcactgctaacttaaaaacgattggttcgatgccgttgcgtctatct
gaggaaattgccattgaggtacgtggagaggcatttatgccaaaacgttcgtttgaagct
ttaaataaggtgaaaaatgaaaaaggtgaagagccatttgctaatccgcgtaatgctgca
gctggatcgttacggcagctagatccgaaaattgcctcgtcgagagcactagatatcttt
ttatacgggatagccggtgcagaaaatgcaaatattacttcgcatagtgaagggcttagt
tggctcgactcgttaggatttaaaacgaataaagaaagacaaaattgtgctgacatcgac
agtgtcattcaatttgttgagagctgggttgaaaaaaggcctaatttgccatatgaaatt
gacgggattgtaataaaagtagattctctaaggcaacaagaaatattgggcacaaccgca
aaaagtcccaggtgggcaattgcttataaatttccagctgaggaggtcgtcacaacttta
atcgatattgaactcaatgtagggcggacaggagtgattaccccaacagctattttagag
ccggttcgtgttgcagggtctactgttgggcgggcatcgttgcataatgaagacctcatt
cgtgaaaaggatattcgacttggtgaccaggttgttgtgaaaaaagctggagatattatt
cctgaggtagtaaatgttcttgttgagagacggactggcgaggaaaaggtatttcaaatg
ccgacatcttgcccagagtgtgaaagtgagcttgttcgtcttgaagaagaagtggccctc
cgctgtattaatccaaaatgtcctgcccaaattcgcgagggtctgattcattttgtgtcc
cgtaatgcaatgaacatcgaggggctaggggagaaggtcatcagtcaattattttcagaa
agcttaattcatgatgtggctgatatttataaacttactcgggaacagctgattgggctt
gaacggatgggagaaaagtcgattcaaaacctactagctgctatcgatggatctaaagaa
aattcacttgaaaagcttttgtttggacttggaattcgtcacgttggtgcaaaagcggcc
aaaacgcttgcccaacattttgaaacgatcgattgcttggcggaagcgacagaggttgag
ttaacagctgttaatgagataggcgaaaagatggccagttcgattgtcacctattttgcc
aaagatgaagtaaacgagctgattcaagaattaaaattggcgtcagttaacatggtctat
aagggtcctaaacgtgttttagcagaggattcgaattccttctttaacggtaaaaccgtg
gtcttaacaggtaagttggagcacctaaataggaatgaggcaaaagaaaaaatagaggca
ctcggaggtaatgttgctgggagtgttagcaaaaaaacgaatcttgtcattgctggggca
gatgcgggatctaagcttacaaaggcagaggaattgggaatagaaatttgggatgaagtg
aaaatgattgaggaactaaataagtaa
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