Balaenoptera acutorostrata scammoni (minke whale): 103008574
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Entry
103008574 CDS
T03086
Symbol
SLIT1
Name
(RefSeq) slit guidance ligand 1
KO
K06838
slit 1
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
103008574 (SLIT1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bacu00536
]
103008574 (SLIT1)
Glycosaminoglycan binding proteins [BR:
bacu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
103008574 (SLIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
LRRNT
Laminin_G_1
hEGF
LRRCT
LRR_1
LRR_9
LRR_14
EGF_TEN
EGF_2
EGF_3
EGF_Teneurin
EGF_DL_JAG
EGF_4
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
103008574
NCBI-ProteinID:
XP_007187490
UniProt:
A0A384AJK2
LinkDB
All DBs
Position
Un
AA seq
1534 aa
AA seq
DB search
MALTPWRGPSAGLVRPELWLLLWAAAWRLGATACPALCTCTGTTVDCHGTGLQAVPKNIP
RNTERLELNGNKITRIHKNDFAGLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQ
LYALPELLFQNNQALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL
RGLEVLTLNNNSITTIPVSSFNHMPRLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT
QCSGPASLRGLNVAEVQKSEFSCSGQGEAGHVPSCTLSSGSCPAMCTCSNGIVDCRGKGL
TAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLN
SLVLYGNKITDLPRGVFGGLFTLQLLLLNANKINCIRPNTFQDLQNLSLLSLYDNKIQSL
AKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQI
KSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEASMVECSSLKLTKIPERIPQ
ATAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQ
LESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRSVRLLSLYDNQIATISPGAFDTL
QALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAVPDFRCE
EGQEEGGCLPRPQCPQECACLDTVVRCSNKHLQALPKGIPKNATELYLDGNQFTLVPGQL
STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLH
GNDVSTLQEGIFTDVTSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGIARCAGPPDME
GKLLLTTPAKKFECLGPPTLAVQAKCDPCLSSPCQNQGTCHNDPLGVYRCACPSGYKGRD
CEVSLDSCSSSPCGNGGTCHSQEGEDAGFTCSCPSGFEGPTCGVNTDNCVEHSCANGGTC
VDGMGSYTCQCPLQYSGAACEQLVDFCSSDLNPCQHEAQCVGTPDGPRCECAPGYAGDNC
TENRDDCEDHRCQNGAQCVDGVNSYSCLCAEGYSGQLCETPPHPPAPRSPCEGTECQNGA
NCVDQGSQPVCQCLPGFGGPECEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDN
GILLYNGDDDHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQFHTVELVTFDQMVNL
SIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYIN
NELQDFTKTRMKPGVVPGCEPCRKLYCLHGICQPNATPGPVCHCEAGWEGLHCDQPADGP
CHGHKCVHGKCVPLDALSYSCQCQDGYSGALCNQAGAPADPCGGLRCLHGHCQASATKGA
HCVCDPGFSGELCEQESECRGDPVRDFHQVQRGYAICQTTRPLSWVECRGSCPGQGCCQG
LRLKRRKFTFECSDGTSFAEEVEKPTKCGCAFCA
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacgccctggagggggccctcggcggggcttgtccggcccgagctctggctg
ctgctgtgggcagccgcgtggcgcctgggtgccacggcgtgccccgccctctgcacctgc
accggcaccacggtggactgccacggcacggggctgcaggccgtccccaagaacattcca
cggaacacggagcgcctggaactcaacggcaacaaaatcactcggatccataagaatgac
tttgcgggactcaagcagctgcgggtgctgcagctgatggagaaccagattggcgtggtg
gaacgcggggctttcgacgacatgaaggagctggagcggctacgactcaaccggaaccag
ctgtacgcattaccagaactgctgttccagaataaccaggctctgtcgaggctggacctg
agtgagaacaccatccaagccatccccagaaaggcttttcgtggggccacagacctcaaa
aatttacagctggacaagaaccagatcagctgcattgaggaaggagctttccgggctctg
cgggggctggaagtgctgaccctgaataacaacagcatcaccaccatccctgtgtccagc
ttcaaccacatgcccaggctgcggaccttccgcctgcactccaaccacctgttctgcgac
tgccacctggcctggctctcccagtggctgaggcagcggccaaccatcgggctcttcacg
cagtgctcgggccctgccagcctgcgcggcctcaacgtggctgaggtccagaagagtgag
ttcagctgctcaggccagggggaggcggggcacgtgccctcttgcaccctctcctccggc
tcctgcccagccatgtgcacctgtagcaacggcattgtggattgtcgtggcaaaggtctc
accgccatccccgccaacctgcccgagaccatgacggagatccgcctggagctcaatggg
atcaagtccatcccccccggagccttctctccctacagaaagcttcggaggatagacttg
agcaacaaccagatctcggagatcgcgcccgacgccttccagggcctccggtccctgaac
tcgctggtcctctatgggaacaagatcacagacctcccccggggagtgtttggaggcctg
ttcaccctacagctcctgctcctgaatgccaacaagatcaactgcatccggcccaacacc
ttccaggatctgcagaacctctcactgctctccctgtatgacaacaagatccagagtctc
gccaagggcaccttcacctccctgcgggccatccagaccttgcatctggcccagaaccct
ttcatctgcgactgtaacctcaagtggctggcggacttcctgcgcaccaaccccatcgag
accagcggggcccgctgcgccagcccccggcgcctcgccaacaagcgcatcgggcagatc
aagagcaagaagttccggtgctcagccaaagagcagtacttcattccaggcacggaggat
taccagctgaacagcgaatgcaatagcgacgtggtctgtccccacaagtgccgctgcgag
gccagcatggtggagtgctccagcctgaagctcaccaagatccctgagcgcatcccccag
gccacggccgagctacgattaaacaacaatgagatttccatcctggaggccaccgggatg
tttaaaaaactcacccatctgaagaaaatcaatctgagcaacaacaaggtgtcggagatt
gaagacggggccttcgagggcgcagcctcagtgagcgagctgcacctgaccgccaaccag
ctggagtccatccggagcggcatgttccggggcctggacggcctgaggacgctgatgctg
aggaacaaccgcatcagctgcatccacaatgacagcttcacgggtctgcgcagcgtccgt
ctcctctcgctctatgacaaccagatcgccaccatctcccctggagccttcgacaccctc
caggccctctccacgctgaaccttctggccaaccctttcaactgcaactgccagctggct
tggctgggcgactggctgcgcaagaggaagatcgtgacggggaacccgcgatgccagaac
ccagatttcttgcggcagattcccctgcaggacgtggctgtccccgacttcaggtgtgag
gaaggccaggaggaggggggctgcctgccccgcccgcagtgcccccaggagtgcgcctgc
ctggacaccgtggtccgatgcagcaacaagcacctgcaggccttgcccaagggcatcccc
aagaatgccacagagctctacctggatgggaatcagttcacgctggttccgggacagctg
tccaccttcaagtacctgcagcttgtggacctgagtaacaacaagatcagttccttaagc
aattcctctttcaccaacatgagccagctgaccactctgatcctcagctacaatgccctg
cagtgcatccctcctttggccttccaggggctccgctccctgcgcctgctgtccctgcat
ggtaatgacgtctccaccctccaagagggcatcttcacagatgtgacctccctgtctcac
ctggccattggtgccaaccccctgtactgtgactgccacctgcgttggttgtccagctgg
gtgaagacaggctacaaggaacctggcattgcccgctgtgccgggcccccggatatggag
ggcaagctgctcctcaccacgcctgccaagaagtttgaatgcctaggtccgcccaccctg
gctgtccaggccaagtgcgatccctgcttgtccagcccatgccagaaccagggcacctgc
cataacgacccccttggggtatacaggtgtgcctgccccagcggctataagggccgagac
tgtgaggtgtccctggacagctgttccagcagcccctgtggaaatggcgggacctgccac
tcgcaggagggcgaggatgccggcttcacgtgctcctgcccctccggctttgaaggaccg
acgtgtggggtaaacacggacaactgtgtggaacactcatgtgccaacgggggcacctgt
gtggacggcatgggcagctacacctgccagtgccccctgcagtactcgggagcggcctgt
gagcagctggtggacttctgctcctcggatttgaacccgtgtcagcacgaggcccagtgt
gtgggcaccccagacgggcccaggtgtgagtgtgcacctggttatgcgggtgacaactgc
acggagaaccgggatgactgcgaggaccaccgctgccagaatggggcccagtgcgtggat
ggagtcaacagctactcctgcctctgtgctgagggttacagtgggcagctctgtgagacc
cctccccacccgcctgcccccaggagcccctgtgaggggactgagtgccagaacggggcc
aactgtgtggaccagggcagccagcctgtgtgccagtgcctcccgggctttggcggcccc
gagtgtgagaagttgcttagcgtcaacttcgtggatcgggacacttacctacagttcacc
gacctgcagaactggccacgggccaacatcacactgcaggtctccacagcagaggacaat
gggatcctgctgtacaatggggacgacgaccacattgcggtggagctgtaccagggccat
gtacgtgtcagctacgacccaggcagctaccccagctctgccatctacagtgccgagacg
atcaatgatgggcagttccacaccgttgagctggtcacctttgaccagatggtgaatctc
tccatcgatggcggcagccccatgaccatggacaacttcggcaaacactacacactaaac
agcgaggcgcccctctatgtgggagggatgccagtggacgtgaattcggccgccttccgc
ctgtggcagatcctcaatggcacgagcttccacggttgcatccgaaacctgtacatcaac
aacgagttgcaggacttcaccaagacgaggatgaagccaggggtggtgccaggctgcgag
ccctgccggaagctctactgcctgcatggcatctgccagcccaatgccacaccggggccc
gtgtgccactgcgaggccggctgggagggcctgcactgcgaccagccagccgacggcccc
tgccatggccacaagtgtgtccacgggaagtgcgtgcctctagatgctctttcctacagc
tgccagtgccaggatgggtactcgggggccctgtgcaaccaggctggggcacctgcagac
ccctgtgggggcctgcggtgcctgcacggccactgccaggcctcagccaccaagggggcg
cactgtgtgtgtgaccccggcttttcgggcgagctgtgcgagcaagagtccgagtgccgg
ggggaccctgtccgggactttcaccaggtccagaggggctatgccatctgccagaccacg
cgcccgctgtcgtgggtggagtgccggggctcatgccccggccagggctgctgccagggc
ctgcggctgaagcggaggaagttcacctttgagtgcagcgatgggacctcttttgccgag
gaggtggagaagcccaccaagtgtggctgtgccttctgcgcttag
DBGET
integrated database retrieval system
