Balaenoptera acutorostrata scammoni (minke whale): 103017354
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Entry
103017354 CDS
T03086
Symbol
SCN4A
Name
(RefSeq) sodium voltage-gated channel alpha subunit 4
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bacu04040
]
103017354 (SCN4A)
Ion channels [BR:
bacu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
103017354 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
103017354
NCBI-ProteinID:
XP_007175814
UniProt:
A0A452CCI1
LinkDB
All DBs
Position
Un
AA seq
1832 aa
AA seq
DB search
MANSSQPTVVPLGPESLRPFTRESLAAIERRVMEEEARKQRNKQMETEGPEQKPCSDLEA
GKNLPHIYGDPPPEVIGIPLEDLDPYYGDKKTFIVLNKGKAIFRFSATPALYVLSPFSTL
RRCAIKVLIHSLFSMFIMITILTNCVFMTMSDPPYWSKHVEYTFTGIYTFESLIKILARG
FCIEDFTFLRDPWNWLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNTTWYGNDTW
YGNDTWYGNDTWNSQESWASNSTFDWDAYINDEGNFYFLEGSNDALLCGNSSDAGRCPEG
YECIKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIF
LGSFYLINLILAVVAMAYAEQNEATLAENQEKEEEFQQMLEKFRKQQEELGKAKAAQALE
GREADEDPAHGKDCNGSLDTSTGEKGPPRPSCSADSGVSDAMEGLEEAHQKCPPWWYKCS
QKVLIWNCCTPWMKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEQFDRVLNV
GNLVFTGIFTAEMVLKLIALDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFR
LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCK
IAADCNLPRWHMHDFFHSFLIIFRILCGEWIETMWDCMEVAGQAMCLTVFLMVMVIGNLV
VLNLFLALLLSSFSADSLAASDEDGEMNNLQIAVARIKWGVGFAKAFLVGLLHGKILSPK
VIMLSLGEIGEAGEAGEAGEAGESVSEDEKKELPPEEDENKDLKKDNHILNHMGLADGPP
RSIELDHLNFINNPYLTIHVPIASEESDLEMPTEEETDTFSEPEDGKKPLQPLDGNSSVC
STADYKPPEEDPDDQAEESPEGEQPEECFTEACVQRFPCLYVDVSRGQGKTWWTLRRACF
KIVEHNWFETFIVFMILLSSGALAFEDIHIEQRRVIRTILEYADRVFTYIFIVEMLLKWV
AYGFKVYFTSAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFQG
MRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCMNTTTSERFDISEVNN
KSECESLMHTGQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMSIMYAAVDSREKEEQPQY
EVNIYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDLFMTEEQKKYYNAMKK
LGSKKPQKPIPRPQNKLQGMVYDLVTKQAFDITIMMLICLNMVTMMVETDDQSQLKVDIL
YNVNMIFIIIFTGECVLKMLALRQYYFTIGWNIFDFVVVILSIVGLALSDLIQKYFVSPT
LFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFA
YVKKESGINDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGTSVR
GDCGNPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMFYESWE
KFDPDATQFIDYSRLSDFVDTLQEPLRIAKPNKIKLITMDLPMVPGDKIHCLDILFALTK
EVLGDSGEMDSLKETMEEKFMASNPSKVSYEPITTTLKRKHEEVCAIKIQRAYRRHLLQR
SVKQASYMYRHSQDSSGDAAPEKEGLIADTMSKMYDPENGNSGVQSKGEGRGSAWDPRPA
MGLLSVRPTDTALPPAPPPGQTVRPGVKESLV
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atggccaactcatctcagcccacggtggtgcctctgggccctgagagcctgcgccccttc
acccgggagtccctggcagccatagaacggcgggtgatggaggaggaggcccggaagcag
cggaacaagcagatggagactgaggggcccgaacagaagccgtgcagtgacctggaggct
ggcaagaacctgccccatatctatggggaccccccaccggaggtcattggcatccccctg
gaggacctggatccctactacggtgacaagaagaccttcatcgtgctcaacaagggcaag
gccatcttccgcttctctgccacacctgctctctacgtgctgagccccttcagcaccctc
agacgctgcgccatcaaggtgctcatccactcgctgttcagcatgttcatcatgatcacc
atcttgaccaactgcgtgttcatgaccatgagcgacccgccctactggtccaagcatgtg
gagtacaccttcacagggatctacacctttgagtccctcatcaagatcctggcccgaggc
ttttgcatcgaagacttcacattcctccgggacccctggaactggctggacttcagcgtc
atcatgatggcgtacctgacggagtttgtggacttgggcaacatctcagccctgagaacc
ttccgggtgctgcgggccctgaaaaccatcacagtcatcccagggctgaagaccattgtg
ggagccctgatccagtcggtgaaaaagctgtcagatgtgatgatcctcaccgtcttctgc
ctgagtgtctttgccctggtggggctgcagctcttcatgggaaacctgcggcagaagtgt
gtgcgctggcccccgcccttcaatgacaccaacaccacgtggtacggcaatgacacctgg
tacggcaatgacacctggtatggcaatgacacctggaacagccaggagagctgggccagc
aactctacctttgactgggatgcctacatcaatgacgaagggaacttctatttcctggaa
ggctccaatgacgccctgctctgtgggaacagcagcgacgctgggcgctgccctgagggt
tacgagtgcatcaaggccgggcggaaccccaactatggctacaccagctatgacaccttc
agctgggccttcctggctctcttccgcctcatgacacaggactattgggagaacctcttc
cagctgacccttcgagcagccggcaagacctacatgatcttcttcgtggtcatcattttc
ctgggctccttctacctcatcaacctgatcctggcggtggtggccatggcatacgctgag
cagaacgaggccaccttggccgagaatcaggagaaagaagaagagtttcagcagatgctg
gagaaattcagaaagcagcaggaagagctggggaaggccaaggccgctcaggctctggaa
ggtagggaggcagacgaggacccagcccacggcaaagactgcaacggcagcctggacaca
tcaacgggggagaaggggcccccgagacccagctgcagcgcagacagcggcgtctcagat
gctatggaagggctggaagaggcccaccagaagtgcccaccgtggtggtacaagtgttcc
cagaaagtgctcatatggaactgctgcaccccgtggatgaagttcaagaatatcatccac
ttgatcgtcatggaccccttcgtggacctgggcatcaccatctgcatcgtgctcaacacc
ctcttcatggccatggagcattaccccatgacggagcaatttgacagagtgctcaacgtg
ggcaacctggtcttcacgggcatcttcacagcagagatggtgctgaagctcatcgccctg
gacccctatgagtacttccagcagggctggaacatcttcgacagtatcatcgtcaccctc
agcctggtggaactgggcctggccaacgtgcaggggctgtcggtgctccgctccttccgt
ctgctgcgggtcttcaagctggccaagtcgtggccaacgttgaacatgctcatcaagatc
atcggcaactcggtgggggcactgggcaacctgacgctggtgctggccatcatcgtgttc
atcttcgccgtggtgggcatgcagctgttcggcaagagctacaaggagtgcgtgtgcaag
atcgccgcagactgcaacctgccccgctggcacatgcacgacttcttccactccttcctc
atcatcttccgcatcctgtgcggggagtggatcgagaccatgtgggactgcatggaggtg
gccggccaggccatgtgcctcaccgtcttcctcatggtcatggtcatcggcaacctggtg
gtcctgaacctcttcttggccctgctgctcagctccttcagcgccgacagcctggcagcc
tcggacgaggatggcgagatgaacaacctgcagatcgccgtcgcacgcatcaagtggggc
gtcggcttcgccaaagccttcctcgtggggctgctgcatggcaagatcctgagccccaag
gttatcatgctcagcctcggggagattggggaggctggcgaggccggcgaggccggcgag
gctggggaaagtgtctccgaagacgagaagaaggagctaccgcccgaggaggatgaaaac
aaggacctcaagaaggacaatcatatcctgaaccacatgggcctggctgacggccctccc
cgcagcattgagctggaccacctcaacttcatcaacaacccctacctgaccatccacgtg
cccatcgcctccgaggagtctgacctggagatgcccacagaggaggaaacagacaccttc
tcggagcctgaggatggcaagaagccgctgcagcccctcgacgggaactcctccgtctgc
agcactgccgactacaagccccccgaggaggaccccgacgaccaggccgaggagagccct
gagggggagcagcctgaggagtgcttcaccgaggcctgtgtgcagcgctttccctgcctc
tacgtggacgtctcccggggccaagggaagacgtggtggaccctccgcagggcctgcttc
aagatcgttgagcacaactggtttgagaccttcattgtcttcatgatcctactcagcagt
ggagccttggccttcgaggacatccacatcgagcagcggcgagtcatccggaccatcctg
gaatacgccgatagggtcttcacctacatcttcatcgtggagatgctgctcaagtgggtg
gcctatggcttcaaggtgtactttaccagcgcctggtgctggctcgacttcctcatcgtg
gatgtctccatcatcagcctggtggccaactggctgggctactcggagctgggacccatc
aaatccctgcggacgctcagggctctgcgtcccctgagggcactgtctagattccagggc
atgagggtggtggtgaatgccctcctgggagccatcccctccatcatgaatgtgctgctc
gtctgcctcatcttctggctcatcttcagcatcatgggcgtcaacctgttcgccggcaag
ttctactactgcatgaacaccaccacctccgagaggttcgacatctccgaggtcaacaac
aagtccgagtgcgagagcctgatgcacacgggccaggtccgctggctcaatgtcaaggtc
aactacgacaacgtgggtctgggctacctctccctcctgcaggtggccaccttcaagggc
tggatgagcatcatgtatgcagccgtggactcccgggagaaggaggaacagccccagtac
gaggtgaacatctacatgtacctctatttcgtcatcttcatcatcttcggctccttcttc
accctcaacctcttcattggcgtcatcatcgacaacttcaaccagcagaagaagaagttt
ggagggaaagacctcttcatgacggaggaacagaagaaatactataacgccatgaagaag
cttggctccaagaagcctcagaagccaattccccggccccagaacaagctccagggcatg
gtgtacgacttggtgacgaagcaggcgttcgacatcacgatcatgatgctcatctgcctc
aacatggtcaccatgatggtggagacggatgaccagagccagctcaaggtggacatcctc
tacaacgtcaacatgatcttcatcatcatcttcacgggcgagtgcgtgctcaagatgctg
gccctgcgccagtactacttcaccatcggctggaacatcttcgacttcgtggttgtcatc
ctgtccattgtgggccttgcactctctgacctgatccagaaatacttcgtgtcacccacg
ctgttccgtgtcatccgcctggcgcggatcgggcgcgtcctacggctgatccgaggggcc
aagggcatcaggacgctgctgtttgctctcatgatgtcactgcccgccctcttcaacatc
ggcctcctcctcttcttggtcatgttcatttactccatcttcggcatgtccaacttcgct
tacgtcaagaaggagtcgggcatcaacgacatgtttaactttgagaccttcggcaacagc
atcatctgcctctttgagatcaccacgtcggccggctgggacgggctcctcaaccccatc
ctcaacagcgggccccccgactgtgaccccacgctggagaacccgggcaccagcgtcagg
ggtgactgcggcaacccctccatcggcatctgcttcttctgcagctacatcatcatctcc
ttcctcatcgtggtcaacatgtacatcgccatcatcctggagaacttcaacgtggccacg
gaggagagcagtgagcctctcggggaggatgacttcgagatgttctacgagtcgtgggag
aagtttgaccccgacgccacgcagttcatcgactacagccgcctctccgacttcgtggac
accctgcaggagccgctgaggatcgccaagcccaacaagatcaagctcatcacaatggac
ctgcccatggtgccaggggacaagatccactgcctggacatcctctttgccctgaccaaa
gaggtcctgggagactctggggagatggactccctcaaagagaccatggaggagaagttc
atggcttccaacccatccaaggtctcctacgagcccatcacaaccaccctcaagaggaag
cacgaggaagtgtgcgccatcaagatccagagggcctaccgccggcacctgctgcagcgc
tccgtgaagcaggcttcctacatgtaccgccacagtcaggacagcagcggggacgcagcc
cctgagaaggaggggctgattgctgacaccatgagcaagatgtatgaccctgagaacggg
aacagtggtgtgcagagcaagggggaggggagaggctcagcctgggaccccagacctgcc
atggggctcctgtccgtcagacccacagacacagccctccctcccgccccacccccaggg
cagacggtgcgcccaggggtcaaagagtctcttgtctag
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integrated database retrieval system
