Bacterioplanoides sp. SCSIO 12839: KFF03_08240
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Entry
KFF03_08240 CDS
T08310
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
bacz
Bacterioplanoides sp. SCSIO 12839
Pathway
bacz01501
beta-Lactam resistance
bacz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
bacz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KFF03_08240
01503 Cationic antimicrobial peptide (CAMP) resistance
KFF03_08240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bacz02000
]
KFF03_08240
01504 Antimicrobial resistance genes [BR:
bacz01504
]
KFF03_08240
Transporters [BR:
bacz02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
KFF03_08240
Antimicrobial resistance genes [BR:
bacz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KFF03_08240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UTW49856
LinkDB
All DBs
Position
complement(1791608..1794865)
Genome browser
AA seq
1085 aa
AA seq
DB search
MNQSNPLGLSGVIARAFQNSAITPLLAIIGLLLGFFAIVVTPKEEEPQIDVTFANVFIGY
PGASPKEVEQLVAIPAEQVLSEIKGVDDIFSISQPGQAVLTVAFEVGIPREEAILNLYNQ
VYSHNDWFPANLGVMPPVIKPMGIDDVPIMSITLSSADDEVDGEQLTQLAHALETELKRV
PGTRDIYTLGEQSSVVHVELDPARMNGHGLAFSDVRNALMSANAGGQQQPLIQHNQVIQV
EVGSFLSSTAELGQLIVGKNAGGLVYLQDIANIRLQPDTAEQYSRHIPISTQTDASSRNA
VTLVIAKQPGMNAIDITADISQRLQALKNHLIPDNIDADITRDYGLTAKDKSDKLIAKLL
FATAAVVVLVLATMSWREAVIVGGAILITLAITLFASWAWGFTLNRVSLFALIFSIGILV
DDAIVVVENIHRHMHLNANKKLLEIIPAAVDEVGGPTILATFTVIAALMPMAFVTGLMGP
YMSPIPINASTGMLISLIVAFVVTPWLSYKLLSAQQPASPKPSANKTSHEASHKAEDIKT
DKLYRLFDRLMRPFIEGAQAARKRLLLFVGVMALIAFAVSLPVFKAVVLKMLPFDNKSEF
QVIVDMPEGTPVEQTLAVLEELSQELSRVPEVKDLQLYAGNAAPINFNGLVRQYYLRRQP
NQGDIQVNLLDKSQRQRQSHAIALSVREPLQQIGQRLNANVKVVEVPPGPPVMAPIVAEV
YGTHYPDQIKAAKALRSLFENTDDIVDVDDWVEADQPKWLIDIDRQRAAHLGVSQSSIVQ
AVNTALGGEDVSYLHVENNKYPLPIRLELSEGNKVNLSQLLVMKVRAADGSFVSIGDLIR
VHETTTDKNIYRKNLQPVVFVTADMAGELDSPLYGLFAAISAMPDAGLNWKQHFIKEPAI
PTATEIKWDGEWQITYETFRDMGIAYGVGMILIYLLVVAQFRSYRVPLIIMAPIPLTIIG
VMPGHALFGAQFTATSMIGMIALAGIIVRNSILLVDFINQQLEEGMRFEDAVVTSAAVRA
RPIVLTAVAAMIGAFFILDDPIFNGLAISLIFGILISTLLTLVVIPLLYFAAMRNSQHIT
ESSQQ
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaatcgaatccattaggcctctcgggtgtaatcgcacgggcttttcagaattct
gccatcaccccactgctggcaatcattggcctgctattgggctttttcgccatcgttgta
acccccaaagaagaagaaccacaaatcgacgtgacctttgccaatgtctttattggttac
ccgggcgccagcccgaaagaggtggaacaattagtcgccataccggcagaacaggtgctg
tctgaaatcaaaggggtcgatgatattttttcgatttctcagccaggtcaggctgtactg
acggttgcctttgaagtgggtataccgcgtgaagaagccattctgaatctctacaatcag
gtttacagtcacaatgactggtttccagccaacctcggcgttatgccgccagtgatcaaa
cccatgggcattgatgacgtacccattatgagtatcactttatcgtcagcagatgacgag
gttgatggcgaacaactgacgcagctggcacacgcattagaaacggaactcaagcgcgtt
cccggcacccgggatatttatactctcggcgagcaatcatcggtggtgcatgtcgagctg
gacccggcccgaatgaatggccatggcctggcgttcagcgatgttcgtaacgccttaatg
agcgccaatgcgggtggccaacaacaaccgttaatccaacacaatcaggtcattcaggta
gaagttggcagcttccttagctcaacggctgaattggggcaactgattgtcggcaaaaac
gccggtggcttggtgtatttgcaagatattgccaatattcgcctgcaacctgataccgca
gagcaatacagccgccatatccctatcagcactcagaccgatgccagcagtcgtaatgct
gtcaccctggttattgccaaacagcccggcatgaatgccattgatatcacggcagacatt
tcacaacgcctgcaagccctcaaaaaccatctgattccagacaacattgatgctgatatc
acccgggattatggcctcactgcaaaagataagtccgacaaactgattgccaagctgctg
tttgccacagccgccgttgtggttctggtattggccaccatgagctggcgtgaagccgtg
attgtcggaggtgccattttaatcacgctggcgattacgttatttgcctcctgggcctgg
ggttttacgcttaaccgggtgtctttgtttgcgctgattttttccatcggcattctggtc
gacgacgccattgttgtggttgaaaatatccatcgccacatgcatctgaatgcgaataaa
aagctgttggaaattatcccggcggcggtcgatgaggtgggtggccccaccattcttgcc
acctttacggtgattgcggcattaatgccaatggcgtttgtaaccgggttaatgggtcct
tatatgagcccaatcccgatcaacgcctccaccggcatgctgatctctctgattgttgcg
tttgtggttaccccctggctgtcgtacaagctactgagcgctcagcaaccagcaagcccg
aagccatcagcgaacaagacatcacatgaggcatcacataaggccgaggacataaaaacc
gacaaattgtatcgcttatttgaccgactgatgcggccgtttatcgaaggcgctcaggca
gccagaaaacgcttactgttgtttgttggcgtgatggcattaatcgccttcgccgtttcc
ttacccgtattcaaagccgtcgtgctgaaaatgctgccgtttgataataagtcggaattt
caggtcattgtcgatatgcccgaaggcactccggttgaacaaacattggctgtgcttgag
gaactgtcccaggagcttagccgcgttcccgaagtcaaagacctgcaactttatgcaggc
aacgcagcgccgattaactttaacggcctggtgcgccagtattaccttcgccgtcagcca
aatcagggggatattcaagtcaacctgctggataaatcgcaacgacaacgccagagccat
gcgattgctctgtcggttcgtgaaccgttgcagcaaatcggccaacgcctgaatgccaac
gtcaaggttgttgaagtcccccctggcccacccgtcatggctcctattgttgccgaagtg
tatggcacccattacccggaccagatcaaggcagccaaagcactgcgtagcctgtttgaa
aataccgacgatattgttgatgttgatgactgggttgaagccgatcaaccgaagtggctg
atcgatattgatcgccagcgggcagcacaccttggagtgagtcaaagcagcattgttcag
gctgtgaataccgcattaggcggcgaagatgtcagctacctgcatgttgaaaataataaa
taccccttacccatcaggctggagttaagcgagggcaataaggttaacctcagtcagcta
ctggtgatgaaagtccgggcagccgacggcagttttgtttcgattggtgatctgatccgg
gtgcatgagacaacaacagataaaaatatttaccgcaaaaaccttcagccggtggtattt
gtcacagccgacatggcgggagaactcgacagccccttatatggcttatttgccgctatt
tctgctatgcctgatgccggactgaactggaaacagcacttcataaaagaacccgcaatc
cccacagccacggaaataaaatgggacggtgagtggcaaatcacctacgaaactttccgt
gacatgggtattgcttatggggttggaatgattctgatctaccttctggttgtcgctcag
tttcgctcctaccgggtaccgctgatcatcatggcaccgattcctttgaccattattggt
gtcatgccaggccatgccttatttggcgctcagttcaccgccacctccatgattggcatg
atcgcgttagcaggcattattgtgcgcaactcaatactgctggtggactttatcaaccaa
cagctggaggaaggcatgcgttttgaagatgccgttgtcacctctgctgccgtgcgtgcc
cgccctattgtattaacagccgtagcagccatgattggtgccttttttatccttgatgac
cctatttttaacggactggccatttccctgatttttggcatcctgatttctaccttgctg
accttagtggtgattccactgctgtatttcgcagccatgcgtaacagccagcatataacg
gagtcatcacagcagtag
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