Borrelia afzelii (FLI): BAPKO_0581
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Entry
BAPKO_0581 CDS
T00383
Symbol
lig
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
baf
Borrelia afzelii (FLI)
Pathway
baf03030
DNA replication
baf03410
Base excision repair
baf03420
Nucleotide excision repair
baf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
baf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BAPKO_0581 (lig)
03410 Base excision repair
BAPKO_0581 (lig)
03420 Nucleotide excision repair
BAPKO_0581 (lig)
03430 Mismatch repair
BAPKO_0581 (lig)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
baf03032
]
BAPKO_0581 (lig)
03400 DNA repair and recombination proteins [BR:
baf03400
]
BAPKO_0581 (lig)
Enzymes [BR:
baf01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BAPKO_0581 (lig)
DNA replication proteins [BR:
baf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BAPKO_0581 (lig)
DNA repair and recombination proteins [BR:
baf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BAPKO_0581 (lig)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BAPKO_0581 (lig)
MMR (mismatch excision repair)
DNA ligase
BAPKO_0581 (lig)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BAPKO_0581 (lig)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_5
DNA_ligase_ZBD
HHH_2
PTCB-BRCT
U3_assoc_6
GerPB
CEBP_ZZ
Motif
Other DBs
NCBI-ProteinID:
ABH01821
UniProt:
Q0SMV7
LinkDB
All DBs
Position
565973..567955
Genome browser
AA seq
660 aa
AA seq
DB search
MSSKIQQEIADLKKLIRKWDKEYYVDSLPSVEDFVYDKHILRLQELESKCPEYKTLDSPT
LKFGSDLLNDFKEVEHSVPVLSLDKVYNLDLLKSWIDKIDFSNSFNISVEPKIDGCSIVL
YYKDGILEKALTRGNGKFGNDVTKNIRTIRHVPLFLGEKVDLVLRGEVYITKENFLKINK
FLEKPYTNSRNLASGILRRVDSREVANFPLNIFIYDFLNAGLDFKTNNLAIEKLKKLGFK
VNPLIRFFDQKSSIKEVLNYIADITKKRNSFEYEIDGVVLKVSDFALREKLGYTLHHPKW
AMAYKFEALSGFSKVNSIVVQVGRSGKITPVANIDKVFVSGAFITNATLHNQDYITSINL
NVGDIVKVSRRGDVIPAVEMVINKFSTGFFKVPDKCPSCKTVVVKEGAHFFCTNNNCPSV
AVERIKYFCSKNCMDIEGFSDKTISFLFEKKFISSEIDLYTFNFYKLLKFKGFKDRKINN
LINSIEASKKKPFSKLLLSIGIKELGENTIRLLFLNNLNSFSKLFRLCQDRDFAFLTLLK
IKGIGEKIALNIIDAFNNSIMINKFKVFENLGFKMEERILIDDENKLLVGKKFCITGSFN
GYSRPIVIDKLENKGAIFKTCVTKGLDFLVVGEKAGTKLKKALNLNVKIMSFEDIKSYLD
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaaaatacagcaagaaattgcagatttgaagaagttgatcagaaagtgggat
aaagagtactatgtcgattctttgcctagtgttgaagattttgtatatgataagcatatt
ttaagacttcaagagttagaaagtaagtgccctgaatataagactttagattcccctact
cttaaatttggaagtgatcttttaaatgactttaaagaggttgaacattctgttcctgta
ttaagtcttgataaggtttataatcttgatttgctaaaatcatggatagataagattgat
tttagcaattcttttaatatttctgttgagcctaagattgatggatgttcaattgttctt
tattataaagatggtattcttgaaaaagctcttactaggggtaatggaaaatttggcaat
gatgttactaaaaatattagaaccattaggcacgttcctttatttcttggtgaaaaggtt
gatttagtattaagaggtgaggtttatattactaaagaaaattttttaaaaataaataaa
tttttggaaaagccttatactaattctagaaatttggcttcaggaatacttagaagggtt
gacagcagagaagttgctaatttccctttaaatattttcatttatgattttttgaatgct
ggattggattttaaaaccaataatttggctattgaaaaacttaagaagttgggctttaaa
gttaatcctttgattaggttttttgatcaaaaaagttcaattaaagaagttttaaattat
atagcagatataacaaaaaaaagaaattcttttgagtatgaaatagatggtgttgttctt
aaggttagtgattttgctttaagagaaaaattaggatacactttgcatcatcccaaatgg
gcaatggcttacaaatttgaagcgctctcgggttttagcaaagtaaatagtattgttgtt
caggttgggcgtagtggtaaaattactccggttgctaatattgacaaagtttttgtttca
ggggcttttattactaacgcaacattgcataatcaagattatataacgtctattaattta
aatgttggtgatattgttaaagtttcaagaagaggagatgtaattcctgctgttgaaatg
gtgataaataaattttcaacaggatttttcaaggttcctgataagtgtccatcttgtaaa
acggttgtagtaaaagaaggagcacattttttttgtacaaataataattgtccctcagta
gcagttgagagaataaaatatttttgtagtaaaaattgtatggatattgaagggttttct
gacaagaccatttcttttctttttgagaaaaaatttatttcttcagaaattgatctttat
acatttaatttttacaaacttcttaaatttaaagggtttaaagatagaaagataaataat
ttgataaattcaatcgaagctagcaaaaaaaaaccatttagcaaattacttcttagcata
ggaattaaagaattgggagaaaatacaataaggttattatttcttaataatttaaattca
ttttcaaagctttttagactttgtcaagatagggattttgcttttttaacattgttaaaa
attaaaggcataggagaaaaaatcgctttaaatattattgatgcttttaacaattcaata
atgattaataagtttaaagtttttgaaaatttgggatttaaaatggaagagcgcattttg
attgatgatgaaaataagttattagttggtaagaaattttgtattactggatcttttaat
ggttattctaggcctattgttattgacaagctagaaaataaaggagcaatttttaaaact
tgtgtgactaagggtttagattttcttgttgtaggagaaaaggctggtacaaagcttaaa
aaagctttgaatttaaatgtaaaaattatgtcttttgaagacataaaaagttacttagat
taa
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