Bombus affinis (rusty patched bumble bee): 126915339
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Entry
126915339 CDS
T09368
Name
(RefSeq) dosage compensation regulator isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
baff03041
]
126915339
03012 Translation factors [BR:
baff03012
]
126915339
Enzymes [BR:
baff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
126915339
5.6.2.6 RNA 3'-5' helicase
126915339
Spliceosome [BR:
baff03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
126915339
Translation factors [BR:
baff03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126915339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
Dicer_dimer
HA2_C
nSTAND3
ATPase
AAA_14
DUF7688
AAA_19
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
126915339
NCBI-ProteinID:
XP_050575887
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All DBs
Position
4:complement(16326089..16331358)
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AA seq
1236 aa
AA seq
DB search
MGDIKSFFHQWCAKNCKEPQFDIRPTGPKHRQRFLCELRVPGFDYVGAGNSTSKKDAQGN
AAKDYVNYLVRSRHVNADDVPKDTQSIQQQGTVTIKSEPVYPIKSVFQDGMGPNDIGEAY
RAYNEHGEINYTYIDRIADQKKVEDAEDVDVNSGIHGNWTIENAKSKLHQFMQTNKINAD
YKYTPLGPDHMRGFMAEMTFYVRQLGRNITGRETGSNKQTASKSCALSLVRQLYHLGVIE
SFSGTLKKHREAEQIKPYPVKISPDLINQIHDVLNDLDIKPIPVNLYRTCKKEERDPFNV
SCSLLTNQVLDDFISSAPQPAGVISWSPPQQNWNPWTGCNIDEGPLAVMPLEQLSEDLLH
EQRERLQEDERLQKSIKERSYLPVFSMKNEIMNAINENPIIIIRGNTGCGKTTQVCQFIL
DDYIASGQGACCSIAITQPRRISAVSVADRVALERCEDLGLSVGYSVRFESYLPRPYGSI
LFCTIGVLLRKLEGGLRGVSHVIVDEIHERDVNSDFIMVVLRDMIHMYPDLRIILMSATV
DTTLFSNYFNNCPVIEIPGRSYPVQQYFLEDCIQLTNFVPPLDSKKRKSRDTDDIPMEGE
PEENLNKIIDIQYSIQTKNAMAQLNEKEISFELIEALLKHIKKQSISGAILIFLPGWNLI
FALMKHLQQHPIYGGSSYMIIPLHSQLPREDQHKVFEPVMPEITKIILATNIAETSITIN
DVVYVIDSCKAKMKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGYCFHLCSKARYN
KMDEHMTPEMFRTPLHELALSIKLLRLGSIGKFLSKAIEPPPIDAVIEAEVVLREMKCLD
ENNELTPLGKILARLPIEPRLGKMMILGCIFCVGDALSTMAANSTTFLEVYNMGPDLKRL
SAQQKSFAGARYSDHVAMLHAFQAWEEARSMGEYEEQTFCDSKNLSMPTLRVTWEAKNQL
QVLLVSAGFPEKTLSPTPLNYHAGADTRLDTITALLCMGLYPNVCYHKEKRKVLTTESKA
ALIHKTSVNCSNFEQNFPFPLFVFGEKIRTRAVSCKQMTMVSPIHLLLFGSRKVEYVNNV
VKLDNWINLDMDPTHAAAIVALRPALESLVVKAAKEPETILELNPNEQKVLNVIKSLCGM
NACRYELDQVTGGFYSKRPPRRYSTGFHSGNGNPAKLMRGAGGYRGSLYGEGGSRYSRNS
YCGYSGGGNRGYGMSNSRGRGSGIRGGRGGGFRSRY
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatataaaatccttctttcatcaatggtgcgcaaaaaattgcaaagaaccacaa
tttgatataagaccaacagggccgaaacaccgacaacgatttctttgtgaattacgagta
cccggatttgattacgtgggtgcaggaaattcaactagcaaaaaagatgctcaaggaaat
gcagccaaagattacgttaattatttagttcgatcaagacatgtaaatgctgatgatgtt
ccaaaagatacacaaagcattcaacaacaaggaacagtaactattaaatcagagcctgta
tatccaataaaatctgtatttcaagatggaatgggtccaaacgacataggtgaagcatat
agggcttataatgaacatggtgaaatcaattatacttatattgatagaatagcagatcag
aaaaaagttgaagatgcagaagatgttgatgtgaattctggaattcatgggaattggact
atagaaaacgccaaatcaaaacttcatcaatttatgcaaactaataaaattaatgctgat
tacaaatatactccacttggtccagatcatatgagaggtttcatggcggaaatgacattt
tatgtaagacaacttggaagaaatattactggtcgtgagactggttcaaataagcaaact
gcatcaaaaagttgtgccttgtctcttgttcgacagttgtatcatcttggtgttattgag
tcatttagtggaactttgaaaaaacatagagaagcagaacaaataaaaccatatccagtt
aaaatttcaccagatttgataaatcagatacatgatgttctgaacgatctggatataaaa
ccaattccagtgaacctatatcggacatgtaaaaaggaagaaagagatccatttaatgtt
tcgtgctcattattaacaaatcaagtgttagatgattttatttcatcagcaccacaacca
gctggagtaataagttggtctcctccacaacaaaattggaatccatggactggttgcaat
attgatgagggaccattagccgtaatgcctttagaacagctgtcagaggatttattacat
gaacaacgtgaaagattgcaagaagatgagagacttcaaaaaagtattaaggaaagatct
tatttaccagttttttcaatgaagaatgaaataatgaatgccatcaatgaaaatcctata
attattattcgtggaaacacaggttgtggtaaaacaactcaagtatgtcagtttatttta
gacgactacattgcatcaggtcaaggtgcatgttgtagtatcgctattacacaacctaga
agaatatctgccgtatctgtagctgatcgagttgctttagaaagatgcgaagatttagga
ctatctgttggatattctgtaagatttgaatcctatttgccgagaccttatggcagtata
ttgttttgtactattggcgtacttttaagaaaattagaaggtggcttaaggggtgtatcg
catgttattgttgatgaaattcacgaacgagatgttaattctgattttattatggttgta
cttcgtgatatgattcatatgtatccagatttgcgaattattctaatgtctgctacggtc
gacactacattattcagtaattacttcaataattgtccggtaatagaaatacctggaaga
tcgtatccagtacaacaatatttcttagaagattgtatacaattaacaaattttgtacca
cctttggattcaaagaaacgaaaaagtcgagatacagatgatataccaatggaaggagaa
ccagaagaaaatttaaataaaattattgacatacagtactctatacaaacaaagaatgcc
atggcgcaacttaatgaaaaggagataagctttgaacttatagaagctctactaaaacac
attaagaaacagagtatatctggtgctatactaatatttttacctggttggaacttaata
ttcgcattaatgaaacatttacaacaacaccctatttatgggggatcaagttacatgatt
ataccactgcattcacaattaccaagagaagatcaacataaagttttcgaacctgtaatg
ccagaaataacgaaaattattttagcaacaaatattgccgagacctcaatcacaattaac
gatgtagtttatgtaatagattcttgcaaagctaaaatgaagctttttacttctcataat
aatatgacgaattatgctactgtttgggctagtaagacaaacttagaacaaagaaagggt
cgagcaggccgtgttagaccagggtattgtttccatctatgttctaaagcgcgatacaat
aaaatggatgaacatatgacacccgaaatgtttagaacgcctttacacgagctagcattg
agtattaaattattaagattaggaagtattggaaagttcttgtcaaaagcaattgaacca
ccaccaatagatgctgtaatcgaagcagaggtcgtattacgcgagatgaaatgtttggat
gaaaataatgaattaacgcctcttggaaaaatattggctcgattaccaatagaaccacgt
ttgggtaaaatgatgatcttaggttgtatattttgtgtgggtgatgcactttcaacaatg
gctgcgaatagtacaacatttctagaagtgtataatatgggacctgatctgaaacggtta
tctgcacaacaaaaatcatttgctggtgcaaggtatagcgatcatgtagcaatgttacat
gctttccaagcatgggaagaagctagatctatgggagagtatgaagaacaaacattttgt
gattcgaaaaatttaagtatgcccacattaagagtgacatgggaagctaagaatcaattg
caagtacttttggtaagtgcgggatttccggaaaaaactctttcccctacaccgttaaat
tatcacgctggtgcagatactcgtcttgatacaattactgcattattatgtatgggtctt
tatccaaatgtttgctatcacaaagaaaaaagaaaggttcttactactgaatctaaagca
gcgttgattcacaaaacgtcagtgaattgcagtaattttgagcaaaatttcccatttcca
ttattcgtattcggggaaaagattcgtacaagagcagtatcttgtaaacaaatgactatg
gtatcaccgattcatttgttattatttggttctcgaaaggtcgagtacgtcaataatgta
gtaaaactggataactggatcaacttagatatggatccgactcatgcagcagcaatagta
gctttacgacccgcattagaaagtctcgttgtgaaagctgcgaaagaacctgaaactatt
ctggaattaaatcctaatgaacaaaaagtattaaatgtaatcaaatcgctttgcggaatg
aatgcttgccgttatgaactggatcaggttacaggtggtttctattcaaaaagaccacca
aggagatattcgactggttttcattcggggaacggtaatcccgcaaaattaatgcgcgga
gctggcggttatcgcggaagcctttatggtgaaggcggtagtagatattcaagaaacagt
tactgtggatacagtggcggtggtaatagaggatacggaatgagtaattcacgtggaaga
ggcagtggaattaggggtggtagaggaggaggttttcgtagtcgttactga
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integrated database retrieval system
