Bombus affinis (rusty patched bumble bee): 126920506
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Entry
126920506 CDS
T09368
Name
(RefSeq) breast cancer type 1 susceptibility protein-like isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03440
Homologous recombination
baff03460
Fanconi anemia pathway
baff04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126920506
09124 Replication and repair
03440 Homologous recombination
126920506
03460 Fanconi anemia pathway
126920506
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
baff01009
]
126920506
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
baff04121
]
126920506
03036 Chromosome and associated proteins [BR:
baff03036
]
126920506
03400 DNA repair and recombination proteins [BR:
baff03400
]
126920506
Enzymes [BR:
baff01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126920506
Protein phosphatases and associated proteins [BR:
baff01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126920506
Ubiquitin system [BR:
baff04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126920506
Multi subunit type E3
BRCC complex
126920506
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
126920506
DNA repair and recombination proteins [BR:
baff03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
126920506
BRCA1-A complex
126920506
BRCA1-B complex
126920506
BRCA1-C complex
126920506
BRCA complex
126920506
FA (Fanconi anemia) pathway
Downstream FA components
126920506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
zf-rbx1
TRAF3_RING
Prok-RING_4
zf-RING_4
zf-Nse
RTT107_BRCT_5
zf-RING_10
BRCT_3
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
126920506
NCBI-ProteinID:
XP_050586972
LinkDB
All DBs
Position
9:9104968..9149689
Genome browser
AA seq
1792 aa
AA seq
DB search
MMKQVFITADKLAEEIRNIQKCLQCTICLQTISEPVKTLCGHRFCRQCIQTLLQSKNALC
PLCNRAIQRRSISKDEHMILYIDGLQKLIEAVQSDSGIDILSHLSRPRCTQQSESSVNTE
FTRCDTKELIKPSCSYVDTSLRKEVVSQNQRGRSRKNLTSQKSKTKSTQKKDGGITKYLS
KCGLSGIGQLDESNDSLDENLAQGKVTSWLKDLSKQETLDSPYKAEIVQSPTCNFNDTLF
ISVSQNEPQIKIDNFDEDVDTRMNDDASQSVKQVRRTSLRSENNESDSNNTINRRTSTET
KTAIASSKVDFDTMNPRPSTSRMTRSFDDSKEKSEEKFIDVNRTSPCDMLSSMQKNWSSV
EKFGKEMRTRKKKLKSLNVSIENKGKSRSVDEATANLNKEENVKVVDDIGNRRTRKRKES
VMAEDVANVAVDERFDEGESSAKSDFVRVRDASSPRDRKDRSMSEKVQSTTESSFITLEE
GRQVHIRYLNTCQMNAIIGVTYENSRAGIETDQTNNGEETTLPTKRHVDLFDTPFCDRDK
IFSQTMPVKSNNDQGGPNLLDESPNEKNSSPTPTKEIAMTDEADSTSNLQTSTPHRRRLS
LKRRSTEFKLNNSPSPIVESRIGLQAVKRDLRFEIERESDQADGNVGVDKRNLEEAIETQ
KRRASTDDKLDGKRVRGLTATSTEFTNRRLKNSGCNVSLVTFRKLGKTFKRRRKRIPFLY
LGTTKRKAMVGHYPGFHVQRPCNPVDILDTLDYTIQDGFGNNALITLHDTQIIDEDEGKE
AEPVAAVSSVTEAIVFNNQVDHREENPPQEIQEKIVSVVEIPDSVENKSPDIDVLLVSLS
GNKKPYLLSCDEQFAKSNNTSTKSTVKMIPSTNDSQLQFLSSESPPIDISQTQKLIHETE
PDTETNKVSVSGGFLHMSDQSDSPRTPMRKRKKFDSQDKFCDRMKRKSKVSDEEDVCSNH
SFSSEITCIRNDDKEAPFFQTDLGENCQFSDPSSKDTEIVPVSSGSNISDSEKGNKKKVF
KRILPIANSSTDSPDIVSQGVSPTTKRKRVVSPEVSDEEWNAIVHNWVDERCKKKGKLEQ
TRDSSNLMNASRAVRDNASLKSASSDRDKSSNKLSTLQCRQQLDFAGRSSDEGTNFSGSK
WRKSLEPKDSSIAVEDSPDFGLTIDRIKNIRNKTTELIQADTYDDIIANTDYEEVIIEDD
NGKNRKSRRESVECLETDSYERKSKSVRSCVESSYSSSKDVLCVRSNGSDKENSHQISGA
LSDSDNENEERLVPVYVNMVNKSSRKNRLQENSLKSSGNESMCISNKSLGQRSMISSSQK
HPTNASVSNSTIKDMSEYDSLMDITQHDLMIKQFEMDLFEKNYKNSNVPLEMEKKILQTP
KSNRKKCSNAVGKDVEHSGEEDDIVENTPNTKTKNLGAINSTQRSVVSSFSVSKTLEKPL
PAKILQSATGRCLTNISTPNSMTSIPPLYQSTPKMHQSTCNNATKLVPRANESSNKQTKY
PIQRNMNRSVQENTVQRTNNIEEDVVQIINNSQDNIVKSTNNVRGVEKNIAQRAQYANKQ
RFCFVCSGLTIHEIDLVKKLTQMLDGRYLAQFDKDVTHVIVKADKNNGASNTLKYLQGIV
HRKWIVSYQWVVDSVKERRLVNEESYEVVDSKTLEEGPRKSRCREKGLFEGFCFLCIEPY
VNVSIEQYQDLLRATGAIVVDSLRALAAEKNLMKIILIQADLHEFQIIEWYKQTRAIAIV
DEWIVECISQYKLISFYPYLQELSRQDVLALGFPEYLVEEETGWESDSTCDL
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacaagtgttcattactgctgacaaactagcagaggagattagaaatatacaa
aaatgtttgcaatgcacaatttgcttgcaaaccatatctgagccagtgaaaaccctttgt
gggcatcgattctgtcgccagtgcattcaaacgctattgcaaagtaaaaatgctctctgt
ccactctgcaaccgtgctatacagcgtcgcagcatttctaaggacgaacacatgatatta
tacatcgatggactacagaaactaatcgaagcggtgcaatcggattcaggcatcgatata
ctgtctcatttatcaagaccacgctgcacacaacaaagcgaatcgtcagttaataccgaa
ttcactagatgtgacacgaaggagttgatcaaaccgagctgttcttacgtggacaccagt
ctgcgaaaggaagtcgtttcccaaaatcagagaggtcgatctcgaaaaaacctgacatca
cagaaaagcaaaacgaaatctacacagaagaaagacggcggtatcacgaaatacttgtcg
aaatgtggtttgtctggcataggacagttagatgagtcgaacgattctctagacgagaat
ctggcacaaggcaaagtaacaagctggctgaaggatctgtccaagcaggaaacgttagac
agtccttataaagctgaaatcgtacagtctccaacatgcaattttaatgacacgttattt
atctcagtttctcaaaacgaaccacagatcaagatcgacaattttgacgaagacgttgac
acgaggatgaatgatgacgctagtcaatctgtcaaacaggttcgaaggacatctttaagg
agcgagaataacgaaagcgattcgaacaatacgatcaatcgcaggacgtctacggagaca
aaaactgcgattgcttcgtcaaaggtggactttgatacgatgaatccgaggccgagcacg
tcgaggatgacgagatcgtttgacgatagtaaggaaaagagcgaagagaaattcatagac
gttaacaggacgtcaccctgtgatatgttgtccagcatgcagaagaattggtcctctgta
gagaagtttggcaaagagatgcgcacgaggaagaagaaattgaaatccttgaacgtgagc
atcgagaacaagggaaaatctcggtcagtagatgaagctacggcgaacctgaacaaagag
gaaaatgtgaaagttgtcgacgacataggtaatagacgaacgaggaaaagaaaggagtcg
gtgatggctgaagacgttgcgaatgtcgccgtggacgaaagattcgacgagggggaaagt
tcggcaaaaagtgattttgttcgcgtgagagatgcgtcgtccccgagagatagaaaggat
agatcgatgtcagagaaagttcagtcgaccactgaatcatcctttatcacactagaagag
ggcagacaggtgcacattcgatatttgaacacctgtcagatgaacgcgattatcggcgta
acatacgagaattcacgagctggcattgaaacggaccaaacgaataatggcgaggaaacg
acgctccctacaaaacgacacgtcgatctattcgatacgcctttctgcgatcgagataag
atattttctcaaacgatgccggttaaatcaaacaatgaccaaggtggaccgaatctgctt
gatgaatcgcctaatgagaaaaatagttctccgacaccaacgaaagagattgcgatgacc
gatgaagcagattcaacctcaaacttacaaacttcaacgcctcatcgcagaagattgtct
ctgaagagaagaagtacagagtttaaattgaataattctcccagtccgatcgttgaatct
cgtattggtctgcaggctgttaaacgagacttgagatttgagattgagcgtgaaagtgat
caggctgatggaaacgttggcgtagataagagaaatctggaggaagcaattgaaacacag
aaacgtagagcttctacagatgataaactggatggtaaacgtgtcagaggcttgactgcc
acttcgaccgagtttacgaacaggaggctgaaaaacagcgggtgcaatgtgtccctggtc
acgttcaggaaactagggaaaactttcaagcgtcgcagaaaacgaattcccttcttgtat
ctgggaacaaccaaacggaaagcgatggtgggccattatcctgggttccatgtacaaaga
ccgtgtaatccggttgatatattggacacgctggattatacaattcaagatggctttggt
aacaatgcactaatcacgttgcacgatacacagataatagatgaggacgaaggcaaagaa
gcagaacctgtcgcggcagtaagtagtgtaactgaagcgatcgttttcaataatcaggta
gatcatcgcgaagaaaatccgcctcaagaaattcaggagaaaattgtttcagttgttgag
atccctgacagtgttgaaaataaatctccagatatagacgtactcttggtatccctgagt
ggaaataaaaaaccatatctcttatcatgtgacgaacagtttgctaaatcaaataataca
tcgaccaagagtaccgtaaagatgataccatcaacaaatgactcccagttacagttcctc
tcgtcagaatcccccccgatcgacatttcacagacccagaagctgatccacgaaactgaa
cctgacacagagaccaacaaagtctctgtctctggaggtttcttacacatgtcagatcaa
tccgattctcctcgtacgccaatgagaaaaaggaagaaatttgatagtcaagacaagttc
tgtgatagaatgaaaagaaagtctaaagtcagcgacgaggaggacgtttgctccaatcac
agtttctcgtcagagatcacgtgtattaggaacgacgacaaagaagccccattcttccag
accgatttaggcgaaaattgtcagttctccgatcctagcagcaaagacacggaaatcgta
ccggtaagctctggctcaaatatctcagacagcgaaaaaggaaacaagaagaaggtgttc
aagagaattttgccaatcgccaattcaagcactgattccccggatattgtctctcaaggc
gtctctccaacgaccaagcggaaacgagtcgtttctcctgaagttagcgacgaagagtgg
aacgcgatcgtgcacaactgggtcgacgagaggtgcaaaaagaaaggtaagttggagcaa
actcgtgattcctctaatttgatgaatgcgtctcgcgcggttagagacaacgcttcgtta
aagtccgcctcgtcagatcgtgacaaatctagcaacaaactgtctacgctgcagtgtaga
cagcagttagacttcgctggtagatccagcgacgaaggaaccaatttcagtggatccaag
tggaggaagagtttggagcctaaggattcgtcgattgctgtcgaggactcgcctgatttt
ggattgacgatagatcgaattaaaaatatacgaaacaaaacaacggaacttatacaggcg
gatacttacgacgatatcatagcaaatacagactatgaagaagtcattatagaggacgat
aatggaaagaacagaaaatctagaagagaatcggtcgagtgtttggagacagatagttac
gagagaaaatctaaatcagtaagatcgtgtgttgaaagttcttattcgtcgagtaaagat
gttctgtgcgtacgttctaatggatctgataaggagaatagccaccaaatatctggtgca
ttgtccgatagcgacaatgagaatgaagagagactagttccagtatatgtaaatatggtt
aataaaagttcgaggaagaatagattacaagaaaattcactcaagtcatccggcaacgaa
tcgatgtgtatttcaaacaaatcattgggacagagatcaatgatttcttcttctcagaag
catccaacgaatgcgagtgtgagcaattctacaattaaggatatgtccgaatatgattct
ttgatggacatcacgcaacatgatctgatgattaaacaatttgagatggatctgtttgag
aaaaattataaaaattctaacgtgcctttggaaatggaaaagaagattctacagacgccg
aagagtaacagaaagaaatgttcaaacgcagttggaaaggacgtcgaacactcgggtgaa
gaagacgacattgtcgagaacactcctaacacaaagacgaaaaatttgggagcgatcaat
tcgacgcaaaggagtgtggtatcgtcgttctcggtttcgaagaccttggaaaaaccattg
cctgccaaaatcctacagtcggcgaccggaagatgcctcaccaatatcagcactccgaat
tccatgaccagcattcctcctctctaccagagcaccccgaaaatgcatcagtctacctgc
aataacgccacgaagcttgttcctcgcgcgaatgaatcctctaacaagcagacgaagtat
cccattcagcgaaatatgaatcgaagcgttcaggaaaacactgttcagcgtacaaataac
attgaggaagatgtcgttcaaattataaataacagtcaggataatatcgttaaaagtaca
aataatgttcgaggcgttgagaaaaatatcgctcaacgtgcacagtatgccaacaaacag
aggttctgttttgtatgcagcggactgacaattcatgaaatcgatctagtgaagaagtta
acgcaaatgctggacggtagatacctggctcagttcgataaggatgtaacacacgtgatc
gtgaaagctgacaaaaataacggagctagcaacacgttgaaatacctgcagggtatagtc
cataggaaatggatcgtgagttatcagtgggtggtggattcggtaaaggagagaagatta
gtgaacgaggaatcgtacgaggtggtggattctaagactctcgaagaaggccctcgaaaa
tcgcgatgcagagagaagggtttattcgagggattctgctttctatgtattgaaccgtac
gtcaacgtttctatagaacagtatcaggacttgctacgcgctacgggtgccatcgtggtc
gactcgttacgcgctctagccgctgagaagaatttgatgaagatcattttgattcaggcc
gaccttcatgaattccaaattattgaatggtacaaacagactcgtgccatagcaatcgtc
gacgaatggatagtcgagtgtatcagtcagtacaaactgatatcgttctatccatatctg
caggagttgtcgcgacaggacgttctcgcgcttggttttccggaatatcttgtcgaagaa
gagactggctgggagtctgatagcacgtgcgatttgtag
DBGET
integrated database retrieval system
