Bombus affinis (rusty patched bumble bee): 126923095
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Entry
126923095 CDS
T09368
Name
(RefSeq) tyrosine-protein phosphatase Lar isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
126923095
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
baff01009
]
126923095
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
baff04515
]
126923095
Enzymes [BR:
baff01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
126923095
Protein phosphatases and associated proteins [BR:
baff01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
126923095
Cell adhesion molecules [BR:
baff04515
]
Immunoglobulin superfamily
Type II RPTP family
126923095
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
Ig_3
I-set
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Ig_2
ig
Fn3_VIN3
Fn3_ROS1
Ig_VEGFR-1-like_5th
Interfer-bind
PTP-SAK
fn3_SORL1
Fn3_PBP1
Tc-R-P
Ig_RIMBP2
DSPc
Ig_Rha78A_N
Y_phosphatase3
fn3_2
PTPlike_phytase
C2-set_2
PTP-NADK
Ig_5
Fn3_PTPRU
Fn3_R-PTP-O
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
126923095
NCBI-ProteinID:
XP_050592099
LinkDB
All DBs
Position
13:complement(10800133..11078156)
Genome browser
AA seq
2077 aa
AA seq
DB search
MLPNVSQCTPTHVERCNGGIKCAVITGDRGKTGKRVVNMTPIFLVLLVAIDPIIAQNGGN
ISDSQYITYMTSPPTILVRPQSQQVKAGGIASFYCTAEGAPPPQIHWRKNGKRVSQSQSR
YLVHNYENGALLRIEPVRPVRDNTLYECLAENGVGDAVSAEAQLRVYEAEKLPNGFPLIS
QAPTTKVVEMGHNAVLLCTAVGSPPPIISWVRDMLPIDTTNPRYTVLDTGALQITASDVN
DQGKYECVANNSVGTEYSKSAMLYVKVRRVAPTFSIPPPAVSEVRSGGSLNLTCVAVGSP
MPYVKWKKGPSTDLTPDDNLPVGRNVLILTNVKESANYTCTAASDLGIIEVTTMVKVQAL
PSAPENVQVSDITATSVKLTWYYKNPEEVQYYVIQHKPKHVQQAEAEISGITTMYYHVRS
LSPYTEYELTVTAVNAIGRGPASAPVTVTTGETTESTNGGTKPGTAPRKVVARPLSSSTM
VIQWDEPETPNGQVTGYKVYYTTDPNQQMASWQYQLVDNSQLTTISDLTPHTIYTIRVQA
LTSVGPGPLSTPVQIKTQQGVPSQPEMLTAVDIGETKVTLQWNKPTHSAENILSYELYWN
DTYAQEKHHRRIPVTENYTLTGLYPNTLYYVWLAARSQRGEGATTIPYPVRTKQYVPGAP
PRNVSGQAISPTSILVTWEPPPADRSNGRIAYYKLQVVESGRSDSEAKVIKLNDTRFVLD
ELKKWTEYRIWVLAGTSVGDGPPSYPISVRTHEDVPGHPQNVTVTPINSTTIHVKWRPPT
SKEQNGVIRGYHIHVQEMREEGKDLLNEPIRRDVQEDGVLEVNITGLQPDTTYSVQVAAL
TRKGDGDRSPPETVRTPGGVPNRPHVNVKLLSKDPDVVELEWSQPTQTYGDVLGYRIRYG
IKNQTLKEEYIPGNRQHTYKITDLEERGVDYEFRVAGQNAIGFGQETVRFWYSPEGEPTG
PPTNLSYFFQTPDTVCVTWDPPLRQHRNGQITGYDVQFNKKNDHSTTINRNTTKTRAVFT
NLEENTEYVFHVRAHTSRGSGPYSEKITIITEKDIGRAPMSVKAVATSDTSVEVWWEPVP
NRGKILGYQIFYTTTAVEDLDEWKQKTVGLTESAELVNLEKFTQYAITVAARYKTGLGRL
SEKVTVKVKPEDVPLDLRGPDSSTHTMTLSWKPPIKLNPMNYKVSFDAVKEFVDSQGITQ
TQIVPRRQILLDPSVTTTMINELQPFTTYNVNVSAVPRDGQYRPPAKITITTQMAAPKPM
VKPDFYGVVNGEEIQVILPQASEEYGSISHYYLIVVPEDPSTADKQPDELTEDMIAGKGA
KERENAPYIAAKFPHRDIPYTFHLGSGDIYEGYENRKLEKSKRYRIFVRAVVDTPRKHLY
TSSPFSEYLSLDMREVPPGEPPRRPNPNTPVDGNPEVSVKTSGQEPGMVWVVGPIIAALM
VSAFLTLIFFIKRRRQPCKAPDQAAVTRPLMAADISSNHAPSDPVEMRRLNFQTPGMASH
PPIPISELGNHIERLKANDNLKFSQEYESIEPGQQFTWDHSNMEINASKNRYANVIAYDH
SRVILQTIDGMSGTDYINANYCDGYRKQNAYVATQGPLQETFGDFWRMCWELRSSTIVMM
TKLEERTRIKCDQYWPSRGSETYGLMTVTITDVQELATYCIRTFQISRAGYSERREIKQL
QFTAWPDHGVPEHPAPFLQFLRRVRSLNPPESGPLIVHCSAGVGRTGCFIVIDSMLERIK
HEKMIDIYGHVTCLRAQRNYMVQTEDQYIFIHDALYEAVICGNTEVPARNLHSHIQKLMQ
PEIDNITGMELEFKKLSNIKVDSSRFISANLPCNKHKNRLVHILPYECTRVCLQPQRNIE
GSDYINASLIDGYRYRGAYIATQGPLCDTTDDFWRMLWEHNSTIVVMLTKLKEMGREKCH
QYWPSDRSIRYQCFVVDPIAEYNMPQYILREFKVTDARDGASRTVRQFQFIDWPEQGVPK
SGDGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMQYEGVVDIFQT
VRILRTQRPAMVQTEDQYQFCYRASLEYLGSFDHYAN
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atgctaccaaatgtttcacaatgtacgccgacccatgtggaacgctgcaacggtggtatt
aagtgtgcagtgatcacgggagaccgagggaagacgggaaagagggtggtcaatatgact
cctatcttcctcgtcctgttggtggctatcgacccgattattgcgcagaatggtggaaac
atcagcgactcgcagtacatcacatacatgacaagtccgccgacgatcctggtgaggcca
caatcgcagcaggtgaaagcaggagggatagcgagcttctactgtacggcagaaggtgcg
ccgccaccccagatccactggcggaaaaacggaaagagagtttcccaatctcagtcacgg
tacctggtgcacaactatgaaaacggagctttattgcggatcgaacctgtcaggccagtt
cgcgacaacaccctgtacgagtgtctagcggagaacggagttggggacgccgtgtcagcc
gaggcgcagcttagagtctacgaagccgagaaattgccgaacggtttcccgttaatatct
caagcaccgacgacgaaggtggtcgaaatgggtcataacgcggtgctcctgtgcaccgct
gttggatcaccgcctccgatcatttcctgggtacgggacatgctgcccatcgacacgacc
aatccacgctacacggttttggataccggagcgctgcaaatcaccgcatccgacgtgaac
gaccaagggaagtacgagtgcgtggcgaataattccgtcggcacggagtactccaagtcg
gctatgctctacgtaaaagttcgacgagtcgcaccaactttttccattcctccgcccgcc
gtcagcgaagtaagatctggtggatctttgaatttgacctgcgtcgctgtgggttctccg
atgccgtatgtcaaatggaagaaaggtccatccacggatctcactccggatgacaatctg
ccagtcggtagaaacgtgctgatactcacaaacgtgaaggagtctgctaactacacctgc
acagctgccagcgatctcggtatcatcgaagtcacgacgatggtgaaagttcaagccttg
ccgagtgctccggagaacgttcaagtgtccgacatcaccgccacttctgtgaagctcaca
tggtactacaaaaatccggaggaagtgcaatactacgtgattcaacataagccgaagcac
gtgcaacaagccgaagccgaaatatcgggcatcacgaccatgtactaccatgttcggagt
ctgagcccttacaccgagtacgagcttaccgtgacagccgtgaacgccattgggcgtggt
cccgcgagtgcccctgtgacagtcaccactggagaaacgacggaatcgacaaatggaggt
accaaacctggtactgcaccacggaaggtggtcgcccgcccattgagctccagcacaatg
gtcatacaatgggacgagccagaaacgccaaacggacaagtgacgggatacaaagtatat
tatacgacggatccgaatcaacaaatggcctcttggcagtaccagctggtggacaatagc
cagctaaccacgatctcggatttaacgccgcacacgatatacacgattcgagtgcaggcg
ctgacaagcgttggtcccggtccactgagtacacctgttcagataaagacgcaacaaggg
gtaccgagtcaaccggaaatgttgaccgcggtagatatcggagagaccaaagtaacactc
cagtggaacaaacctactcatagcgcggagaatatcctcagctatgagttgtactggaac
gatacttacgcgcaggagaagcatcatcgaaggataccagtcaccgagaactacacgctg
acaggcctgtatccgaacacgctgtattacgtttggttggctgcgcggagtcaaaggggc
gaaggagctacaacgataccgtatccggttcgcacgaaacagtacgtccccggggctccg
cctcgcaatgtaagcggacaagcgatcagcccgacctccatattggtaacatgggaacca
ccgcctgccgatcgatcgaacgggaggatcgcgtactacaagctgcaagtcgtcgagagc
ggacgctccgactcggaggcgaaagttatcaaactgaatgacacgcgattcgtgttggac
gaactgaaaaaatggaccgagtaccggatttgggtattggccgggaccagcgtaggtgat
ggacctccgagttatcctatctcggtcagaactcacgaggacgtgccgggtcatcctcaa
aacgtgacggtaacaccgatcaattcgaccacgatacacgtgaaatggagaccgcccacg
tcgaaagaacaaaacggcgtgataagaggttatcacatacacgtgcaggaaatgagagaa
gagggaaaggatctgttgaacgagccgatacgacgcgacgtgcaagaagacggcgtgctg
gaagtgaacattaccgggttgcaacctgacaccacatactcggtacaagtagccgctcta
acgagaaaaggagacggtgatcgttcgccgccagaaactgtcagaactcccggaggtgta
cccaatagacctcatgttaacgtgaaacttttgtcgaaagatcctgacgtggttgagctc
gagtggtcgcagcctacgcaaacgtacggcgacgtgttgggatatagaatacgatacgga
attaagaaccaaacgctcaaggaagagtacattccaggaaaccgtcagcatacttacaag
atcactgatcttgaggaacgaggggtggattacgagtttagggtagctggtcaaaacgcg
atcggattcggccaagagacggtgcgattctggtacagtcccgaaggagaaccaactggc
ccaccgacgaatttatcctactttttccaaactccggacacggtgtgtgtcacgtgggat
ccgcccctgcgacagcacagaaacggtcagatcaccggttacgatgttcaattcaacaag
aagaacgatcactctacaaccatcaacaggaatacgaccaagacgagagcggttttcacg
aatttggaggaaaatacggagtacgtgtttcacgtgagagcgcacacatctagggggagt
gggccatattcggaaaagatcacgatcataacggagaaagatattggccgggcaccgatg
tcggtaaaagcggtggccacgtcggacacgagcgtggaggtttggtgggaaccggtacct
aaccgtggaaagatacttggatatcaaatattttacacgacaaccgctgtcgaggaccta
gacgagtggaagcaaaagactgtcggtctcaccgagtcggcggaacttgtcaacttagag
aaatttactcagtacgcgatcacggtagcagcgagatataagactggccttggaagactc
agcgagaaggtaaccgtcaaggtgaagccggaagacgtgcctttggatctaagggggccg
gactcgtccacgcataccatgactctttcctggaaaccgcctatcaaactgaaccccatg
aactacaaggtctccttcgatgctgtcaaagagttcgtagattcacaaggtatcacgcaa
acgcagatagtgccacgcagacagattctcttggatcctagcgtgacgacgaccatgatc
aacgaactgcagccgttcaccacgtacaatgtgaatgtgagcgcggtgccaagagatggt
cagtataggccaccggctaagatcaccattaccacgcaaatggcagctccgaagcctatg
gtcaagcctgatttctatggtgtggttaatggagaggagattcaagtgattctacctcag
gcctccgaagaatatggatcaatttcgcattactatttgatcgtcgtgcccgaggacccg
tcaacagcggataaacaacccgacgaattgaccgaggacatgatcgcgggaaaaggggct
aaggaaagggagaatgctccttacatcgctgccaagtttccacatagagatattccgtat
acgttccatcttggcagcggagatatatacgagggttatgaaaatcgtaaacttgagaag
agtaaacgatacaggatctttgtgcgtgccgttgtcgacacaccgaggaagcatttgtac
acttcgtcacccttctccgagtacctgtctctcgatatgagggaagtacctcctggtgag
ccaccacgacgtcccaatccgaataccccggtggatggaaatccagaggtatcggtgaaa
accagcggccaagagccagggatggtgtgggtggtcggtccgataatagctgcgttgatg
gtcagcgcgtttctcacccttatcttctttattaaaagacgaagacaaccctgcaaagca
cccgatcaagcagcggtcacccgaccattaatggccgctgacatcagttcgaatcacgct
ccatccgatccagtcgaaatgcgccgtttaaatttccaaacgcctggcatggcctctcat
cctccaattccgatcagcgaactaggaaaccacatcgagcgcctaaaagcgaacgacaat
ctaaagttcagtcaggagtacgagtcgatcgagcctggacaacaattcacttgggaccac
tccaacatggaaataaacgcttcgaagaatcgttacgcgaacgtgatcgcctacgatcat
tcgagggtgattctgcaaactatagatggcatgtcgggtacagattacataaatgccaat
tactgcgatggatacagaaaacaaaatgcgtacgtagctacgcaagggcctcttcaagag
acatttggagatttctggcgaatgtgctgggaattgagatcgagcacgatcgtgatgatg
acaaagctggaggaacgaacgaggattaagtgcgatcagtattggcctagcagaggttct
gaaacttacggtttgatgactgtgaccatcaccgacgttcaagagctggctacctactgc
attcgaacattccaaatatccagagcgggttactccgagagacgtgaaataaagcaattg
caatttacggcctggcctgatcacggtgtacccgagcatcctgcaccgttcttgcagttc
ttacgtagggtcagatccctgaatccaccagaaagcggaccgctgatcgtccattgtagc
gccggtgttggaagaacgggttgcttcatcgtcatcgattcgatgctcgaaaggatcaag
cacgaaaagatgatcgacatctatggccacgtgacttgtctacgagctcaaagaaactac
atggtccaaaccgaggatcaatacattttcatccacgacgcgctttacgaggcggtgatc
tgtggcaacacagaagtgcctgccagaaacttacattcccacatccagaagctgatgcag
ccagagatcgacaatatcactggtatggaactggaattcaagaaactgtccaacatcaaa
gtagattcgtcgcgattcatctcagcgaaccttccctgcaacaagcataaaaatcgcttg
gtgcacatattgccctacgagtgtaccagagtatgcctgcagccacaacgcaacatcgaa
ggatcggattatatcaacgccagtctcatcgatggatatcgataccgaggtgcttatatc
gccactcaaggacccctctgcgacaccacggatgatttctggcgtatgctgtgggagcat
aattctacgatcgtggtcatgttaacgaaattaaaagagatgggtagagagaaatgccat
cagtactggccgtccgataggtcgattcgttatcaatgctttgtggttgatcccatcgcg
gagtacaacatgcctcagtacattttgcgtgaattcaaagtgacggatgcgagagacgga
gcgagtcgtacagtcagacagttccagttcatcgactggcctgaacagggtgttccaaag
tccggcgacgggttcatcgactttatcggacaggtgcacaaaacgaaagaacagtttggt
caagatggaccgataactgtgcattgtagcgccggagtcgggagaacaggcgtcttcatc
accctgagcattgtattggaacgtatgcagtatgagggagtcgttgacatcttccaaacg
gtcagaatattgcgcacgcaacgacctgctatggttcaaaccgaggaccaataccagttt
tgctatcgcgccagtttggaatatttgggttctttcgatcattacgccaactga
DBGET
integrated database retrieval system
