Buttiauxella agrestis: BADSM9389_27800
Help
Entry
BADSM9389_27800 CDS
T06676
Symbol
rumB
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
bage
Buttiauxella agrestis
Brite
KEGG Orthology (KO) [BR:
bage00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bage03009
]
BADSM9389_27800 (rumB)
Enzymes [BR:
bage01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
BADSM9389_27800 (rumB)
Ribosome biogenesis [BR:
bage03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BADSM9389_27800 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
Methyltransf_12
Methyltransf_11
UPF0020
Methyltransf_4
DUF4239
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
BCG10105
LinkDB
All DBs
Position
complement(2994774..2995910)
Genome browser
AA seq
378 aa
AA seq
DB search
MHCALYQANRCRSCQWIEQPISEQLTAKMNELQQLLEGVAVQDWRAPISGPEHAFRNKAK
MVVSGSVEKPLLGMLHRDGTPEDLTECPLYPASFQAVFAVLKPFIARAGLTPYNVARKRG
ELKYLLLTESQLDGGMMLRFVLRSDAKIEQLRAALPWLQQQLPQLKVISANIQPVHMAIM
EGEQEIPFTEQQWLEENFNGVPLYIRPQSFFQTNPTVAASLYATAREWVRELPVKHMWDL
FCGVGGFGLHCATPDMKLTGIEIAPEAIASARQSAEKLGLTDIHFQALDSTKFATEQEDI
PDLVLVNPPRRGIGQALCYFLNNMAPKYIIYSSCNAQTMAQDIASLAEYRVERVQLFDMF
PHTAHYEVLALLVRLPSP
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgcgctataccaggctaatcgttgccgttcttgtcagtggattgaacagccg
atttctgaacagctcaccgccaaaatgaacgaacttcagcaattactggagggagttgcg
gtgcaagactggcgcgcgccgatcagtggccctgaacacgcttttcgtaataaagctaaa
atggtggtcagcggcagcgtagaaaagccgttgcttggcatgctgcaccgcgatgggacg
cctgaagatttaaccgaatgcccgctttatcctgcctctttccaggcggtttttgccgta
ctgaaaccttttattgctcgtgcgggtttgacgccctataacgtggcgcgtaaacgtggc
gaactgaaatatctgttgctgacggaaagccagttagatggcggcatgatgctgcgtttt
gtattgcgttccgatgcaaaaattgagcagctgcgtgcggcgctgccatggctgcaacaa
caactcccacagctcaaagtgatttccgccaacatccagccagtgcatatggcgattatg
gaaggcgagcaggagattccgttcaccgaacagcaatggcttgaagaaaattttaacggc
gtgccgttatatatacgcccgcaaagtttcttccagactaacccaacagttgctgcgtcg
ttgtatgctaccgcccgcgagtgggtgcgagaattgcccgtcaaacatatgtgggattta
ttctgtggagttggcggctttgggctgcactgcgccactccggatatgaaactgactgga
attgaaattgccccagaagcgattgcctcagctcgccaatcagccgaaaaactcggctta
accgatattcacttccaggcgctggattccacgaaatttgctactgagcaggaagatatt
cctgacctggttttagtgaatccgccaagacgcggtatcggccaggcgctgtgttatttc
ctgaacaacatggctccgaaatacatcatctattcaagttgtaatgcgcagacgatggcg
caggatattgcttcgctggcggaataccgggttgaacgtgtgcagctgtttgatatgttc
ccgcatacggcgcattacgaggtgttggcgttgttggtgcggctgccttcaccttaa
DBGET
integrated database retrieval system
