Buchnera aphidicola Ak (Acyrthosiphon kondoi): BAKON_067
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Entry
BAKON_067 CDS
T01825
Symbol
lig
Name
(GenBank) DNA ligase (NAD+)
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bak
Buchnera aphidicola Ak (Acyrthosiphon kondoi)
Pathway
bak03030
DNA replication
bak03410
Base excision repair
bak03420
Nucleotide excision repair
bak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BAKON_067 (lig)
03410 Base excision repair
BAKON_067 (lig)
03420 Nucleotide excision repair
BAKON_067 (lig)
03430 Mismatch repair
BAKON_067 (lig)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bak03032
]
BAKON_067 (lig)
03400 DNA repair and recombination proteins [BR:
bak03400
]
BAKON_067 (lig)
Enzymes [BR:
bak01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BAKON_067 (lig)
DNA replication proteins [BR:
bak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BAKON_067 (lig)
DNA repair and recombination proteins [BR:
bak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BAKON_067 (lig)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BAKON_067 (lig)
MMR (mismatch excision repair)
DNA ligase
BAKON_067 (lig)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BAKON_067 (lig)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
Nlig-Ia
HHH_5
PTCB-BRCT
DNA_ligase_ZBD
RPA_interact_C
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AEO08435
UniProt:
G2LME7
LinkDB
All DBs
Position
72312..74333
Genome browser
AA seq
673 aa
AA seq
DB search
MTSTKKKIDTLRKNILKYEYFYHTLDQSIVSDAEYDYLLHQLYDLEKKNQELITADSPTQ
KVGSNLLRRFKKIKHFSPMLSLENTFDINGYLNFEARIKKSLNINTSISFCCELKLDGIA
ISLIYEEGIFVRAATRGDGFKGENITANARMIKSIPLKLNGINIPKRLEVRGEVFMLKSD
FITLNKRYKINQNKHFSNPRNAAAGSLRHINPKITAERKLMFSCHGCYFLEDIKEDLSTH
YERLMKCVSWGLPVNKEIIICSNHIEVEKFYKKFEQTRNFLDFDIDGIVIKVNSIEFQKK
IGCNTKSPRWAIAFKFCSAEKITLLKNVKFQVGRTGIITPVAYFDPVYISGVIIQKASLY
NKYEMERLNLHVNDSIIICRSGDVIPKVLSVIKTTRCDNAKKIVFPEFCPVCDTKLLENT
EEKIIRCHSGLTCDAQKKKSLYHFFSKKSLYVIGLGPRIINELIKKKLVKNPIDFFYLKD
VDLIKLKNVGKKKSIKIINSINACKKTTLKSFIYALGIPGVGETISEKIANDFITLDKLI
NANILQLNSVDGIGKVISNNIFNYFSTIANRNMINTLIAKVGVYLNHQEVQELNIKKTCF
LNKKIVLTGTFNAFSRIELKKILINLGAKVFDNISKKIDFLICGQNFGSKFFKANHLKIK
TINEKELKFLIEM
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgacatctactaaaaaaaaaatcgacacattacgtaaaaatattttaaagtatgaatac
ttctaccatacattagatcaatcaatagtttctgatgcagaatatgattatttattgcat
cagttatatgatttggaaaaaaaaaatcaagaactgattactgcagattcacccacacaa
aaagtaggatcaaatttacttagaagattcaaaaaaataaaacatttttctcccatgtta
tcgttagaaaatacatttgatataaatggatatttaaattttgaagcaagaattaaaaaa
tctcttaatattaatacatcaatttctttttgttgtgagcttaaattagatggtattgct
attagtctgatttatgaagaaggaatttttgtacgcgcagcgactcgcggcgatggtttt
aaaggagaaaacatcactgctaatgccagaatgattaaatcaattcctttgaaattaaac
ggaattaatatacctaaaagattagaagttcgaggtgaagtgtttatgttgaaatctgat
tttataacattaaacaaaagatataaaataaatcaaaataagcatttttctaatcctcga
aatgcagcagcaggctcattacgtcatattaatccaaaaataacagctgaaagaaaatta
atgttttcatgtcatggatgttattttttagaagacatcaaggaagatctaagtactcat
tatgaacgattaatgaaatgtgtatcttggggattaccagttaataaagaaattataatt
tgttcaaatcatatagaagttgaaaaattttataaaaagtttgaacaaacaagaaacttt
cttgattttgatatagatggaattgttatcaaagtaaattcaatagaatttcaaaaaaaa
ataggatgcaatacaaaatcgccaagatgggctatcgcatttaaattttgttctgcagaa
aagattacattattaaaaaatgttaagtttcaagttggtagaacaggtataattacacct
gtagcttattttgatccagtatatatatctggagttataattcaaaaagcttcattatac
aataaatatgaaatggaaagattaaatttgcatgttaatgattctattattatttgtcgg
tctggtgatgtgatacccaaagtattaagcgtcattaaaactacacgttgtgataatgca
aaaaaaattgtttttcctgaattttgcccagtgtgcgatacaaaattacttgaaaacact
gaagaaaaaataattcgctgtcattctggactaacatgtgatgctcagaaaaaaaaatca
ttatatcattttttttcaaaaaaatctttatatgtaattggtttgggaccaagaattatt
aatgaattaataaaaaagaaattagtaaaaaatccaatagattttttttatctcaaagat
gttgatttaataaaactaaaaaatgtaggaaaaaagaaaagtataaaaattatcaattct
attaatgcatgtaaaaaaactactctgaaaagtttcatttatgctttgggcatacctggt
gtaggggaaacaatttctgaaaaaatagcaaatgattttataacattagataagttaata
aatgctaatattttgcaattaaattctgtagatggaataggaaaagtcatttcaaataat
atattcaattatttttctacgattgcaaatcgtaatatgattaatacattaatagcaaaa
gtgggagtttatttgaatcatcaagaagtacaggaattgaacattaaaaaaacatgtttt
ttaaataagaaaattgttttaacgggtacttttaatgcattttcaagaattgaattaaaa
aaaattttaataaatttaggggctaaagtttttgataatatttctaaaaaaatagatttt
ttgatttgtggtcaaaattttggttctaaattttttaaggcaaaccatctaaaaatcaaa
actattaatgagaaagaattaaaatttttaattgaaatgtaa
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