Baekduia alba: DSM104299_00346
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Entry
DSM104299_00346 CDS
T09120
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bala
Baekduia alba
Pathway
bala03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bala00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSM104299_00346 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bala03400
]
DSM104299_00346 (pdg)
Enzymes [BR:
bala01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DSM104299_00346 (pdg)
DNA repair and recombination proteins [BR:
bala03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DSM104299_00346 (pdg)
Prokaryotic type
DSM104299_00346 (pdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WCB91673
LinkDB
All DBs
Position
359098..359784
Genome browser
AA seq
228 aa
AA seq
DB search
MWRPPTRARVARIREKLRDVYGVPLAPPHADPLGELVLTVLSQSTNDRNRDVAFLRLRER
FAAWDAVRAAPVAEVEEAIRPGGISKVKSRRIHDILVAIEDTNKVAGSLDLAWMRDAPVP
ESRDFLCALPGVGRKTAACVLLFSYGLRDIPVDTHVSRVGMRLHLLRPGAPFDELHDAML
ALTPPRAELELHVNLLRHGRRTCHAQRPACGACTLRSSCPAFRQVYSR
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
gtgtggcgcccgcccacgcgggcgcgggtcgcccggatccgggagaagctgcgcgacgtc
tacggcgtgccgctcgcgccgccccacgccgacccgctcggcgagctggtcctcaccgtg
ctctcgcagtcgaccaacgaccgcaaccgcgacgtcgcgttcctgcggctgcgcgagcgg
ttcgcggcgtgggacgcggtgcgcgccgcgccggtcgccgaggtcgaggaggcgatccgg
ccgggcgggatctccaaggtcaagtcccggcggatccacgacatcctggtcgcgatcgag
gacaccaacaaggtcgccggcagcctggacctcgcctggatgcgcgacgcgccggtgccc
gagtcgcgcgacttcctgtgcgcgctgccgggcgtggggcgcaagaccgcggcgtgcgtc
ctgctgttctcctacgggttgcgcgacatcccggtcgacacgcacgtctcgcgcgtcggg
atgcgcctgcacctgctgcgtccgggcgcgccgttcgacgagctgcacgacgcgatgctc
gcgctcacgccgccccgcgcggagctcgagctccacgtcaacctgctgcgccatgggcgc
cgcacctgccacgcccagaggcccgcgtgcggggcttgtacgttgagatcttcatgtccc
gcgtttcgccaggtctatagccgatga
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