KEGG   Burkholderia ambifaria AMMD: Bamb_2366
Entry
Bamb_2366         CDS       T00398                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
bam  Burkholderia ambifaria AMMD
Pathway
bam03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Bamb_2366
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bam03400]
    Bamb_2366
Enzymes [BR:bam01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Bamb_2366
DNA repair and recombination proteins [BR:bam03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Bamb_2366
 Prokaryotic type
     Bamb_2366
SSDB
Motif
Pfam: HhH-GPD HHH RecR_HhH HHH_5 EndIII_4Fe-2S HHH_8
Other DBs
NCBI-ProteinID: ABI87922
UniProt: Q0BD51
LinkDB
Position
1:2613182..2613826
AA seq 214 aa
MNATKRRAIYETLQSLNPHPTTELEYTTPFELLIAVMLSAQATDVSVNKAMRKMFPVANT
PRQIVALGEEGVADYIKTIGLYRTKAKNVVAACNILLERYDGEVPADREALESLPGVGRK
TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPKEFLQDAHHWLI
LHGRYVCKARKPECWHCAIEPLCEFRPKTPPPNE
NT seq 645 nt   +upstreamnt  +downstreamnt
atgaacgccaccaaacgacgcgcgatctacgaaacgctgcaaagcctcaatccgcatccg
accaccgagctcgaatacacgacgccgttcgagttgctgatcgcggtgatgctgtccgcg
caggcgaccgacgtgtcggtcaacaaggcgatgcgcaagatgtttccggtcgcgaacacc
ccgcgacaaatcgtcgcgctcggtgaagaaggcgtcgccgactacatcaagacgatcggc
ctgtaccgcaccaaggcgaagaacgtggtcgccgcgtgcaacatcctgctcgagcgctac
gacggcgaggtgccggccgatcgcgaagcgctcgagagcctgccgggcgtcggccgcaag
accgcgaacgtcgtcctgaacaccgcgttcggccagccgacgatcgcggtcgacacgcat
atcttccgcgtcgcgaaccgcacggggctcgcgcccggcaaggacgtgcgggccgtcgag
gccgcgctcgagaagttcacgccgaaggaattcctgcaggacgcgcatcactggctgatc
ctgcacgggcgctatgtgtgcaaggcccgcaagcccgaatgctggcactgcgcgatcgag
ccgctgtgcgaattccggccgaagacgccgccgccgaacgagtga

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