Bacillus velezensis SQR9: V529_23160
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Entry
V529_23160 CDS
T03384
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bamy
Bacillus velezensis SQR9
Pathway
bamy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bamy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V529_23160 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bamy03400
]
V529_23160 (nth)
Enzymes [BR:
bamy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
V529_23160 (nth)
DNA repair and recombination proteins [BR:
bamy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V529_23160 (nth)
Prokaryotic type
V529_23160 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
EDR1
CrtO
Motif
Other DBs
NCBI-ProteinID:
AHZ16342
LinkDB
All DBs
Position
complement(2379290..2379949)
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AA seq
219 aa
AA seq
DB search
MLNLKQIEYCLEKIGDMFPHAECELVHSNPFELVVAVALSAQCTDALVNRVTKTLFQKYK
RPEDYLAVSLEELQQDIKSIGLYRNKAKNIQKLSKMIIEEYGGEVPKDRDELVNLPGVGR
KTANVVVSVAFGVPAIAVDTHVERVSKRLGICRWKDSVLEVEKTLMKKVPKEDWSVTHHR
LIFFGRYHCKAQSPRCAECPLLPLCREGQKRDKKGLVKR
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaatttaaagcagattgaatattgtcttgaaaaaatcggcgatatgtttccgcac
gcagaatgtgaacttgtccattcaaatcctttcgaattggttgtggcagtcgcattatcc
gcgcaatgtacggacgctctagtcaacagagtgacaaaaacgctatttcaaaaatataaa
cggcccgaagattatcttgccgtatcgctggaagaactccagcaggatattaaatcaatc
ggcctgtaccgtaataaagccaaaaatattcaaaagctgagcaaaatgatcatcgaagag
tacggcggagaagtgccgaaagaccgggatgagcttgtgaatctgccgggtgtcggacgg
aaaacggcaaatgtggtcgtgtctgttgctttcggcgtacctgcgattgcagtagacact
catgtggagcgggtctctaaacggctcggtatctgccgctggaaggactctgttttggaa
gtagagaaaacattaatgaaaaaagtgccgaaagaggattggtctgttacgcaccacaga
ttaatatttttcggcaggtatcattgtaaagcgcaatctccccgctgtgcggaatgtcct
ttgcttccgctatgcagagaagggcagaagcgtgacaaaaaagggctggtgaaacggtga
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