Bartonella ancashensis: PU02_0817
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Entry
PU02_0817 CDS
T04086
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
banc
Bartonella ancashensis
Pathway
banc03030
DNA replication
banc03410
Base excision repair
banc03420
Nucleotide excision repair
banc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
banc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PU02_0817
03410 Base excision repair
PU02_0817
03420 Nucleotide excision repair
PU02_0817
03430 Mismatch repair
PU02_0817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
banc03032
]
PU02_0817
03400 DNA repair and recombination proteins [BR:
banc03400
]
PU02_0817
Enzymes [BR:
banc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
PU02_0817
DNA replication proteins [BR:
banc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PU02_0817
DNA repair and recombination proteins [BR:
banc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
PU02_0817
NER (nucleotide excision repair)
GGR (global genome repair) factors
PU02_0817
MMR (mismatch excision repair)
DNA ligase
PU02_0817
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PU02_0817
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
DZR_2
Motif
Other DBs
NCBI-ProteinID:
ALE03631
UniProt:
A0A0M3T2Y1
LinkDB
All DBs
Position
865951..868110
Genome browser
AA seq
719 aa
AA seq
DB search
MSNKNSFQNLTALEARRELEWLAKEIARHDSLYNNNDQPEISDAEYDALRRRNTEIEALF
PELIRPDSPSYKVGSPILDKFEKSIHVQAMLSLENAFNSEDVNEFIKRIRRFLRFSETKT
LELTAEPKIDGLSLSLRYEKGKLICASTRGDGYVGENVTENARTLSDIPKILRGDCPDIL
EVRGEVYMGHSDFQSLNMDQKERGKLIFANPRNAAAGSLRQLDSQITASRKLKFFAYSWG
EVSEMPADTQMGMMKKFKEYGFIINPLTKIFDKVDDLISYYCFIEECRRDLNYDIDGVVY
KVNDLALQRRLGCVSRSPRWAIAHKFSAEKARTLLEAIDIQVGRTGALTPVARLTPITVG
GVMITHASLHNENYIRGIGHKGEKIREGRDIRVGDTVIVQRAGDVIPQIVDVIIEKRPEN
TPYFVFPDSCPACGSYAVREEGEAVCRCTGGLICPAQAIERIRHFVSRNAFDIEGIGKKQ
VEFFFYVRDEMMYIRSPVDIFTLKRRQESALTRLESMEGFGSLSVRKLYDAIDARREIPL
SRFLFALGIRHVGEVNARRLARIYQNYTAFETAVVAAVPQCDETSKGNEAWMELISIEGI
GTRVGKAIVDFYREARNRDVISLLLKEVTPLPEKSIITNHSLISGKVVVFTGTLEHMSRD
EAKALAERLGAKTSSTISKNTNFLIVGTGVGSKLIKAKELGVKIIDEENWLQLVKEHSV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataaaaattcatttcagaatttgactgctctggaagcgaggcgtgagttagag
tggttagcaaaagaaatagcgcgtcatgatagcctctataataataatgatcagcctgaa
atttctgatgcagaatatgatgctcttcgtcgtcgtaatacagagattgaagctcttttt
ccagagttaatacgcccagattctccttcatataaagttggctctccgattcttgataaa
tttgagaagtctattcatgtgcaggcaatgctctctcttgagaatgcatttaattctgag
gatgtgaatgaatttattaaacggattcgtcgttttttaagattttcagaaacgaaaaca
ttggaattaacggctgagcctaaaattgatggtttgtctttgtctttacgctatgaaaaa
ggaaagcttatctgtgcatcaacacgtggtgatgggtatgttggtgagaatgttactgag
aatgcacgaacactttctgatattccaaagattttgagaggagactgccccgatattctt
gaggttcgtggtgaggtttacatggggcatagtgattttcaatcactcaatatggatcaa
aaggagagagggaagttaatttttgcaaatcctagaaatgcagcagctggttctttacgc
cagcttgactcacagataactgctagtagaaagcttaaattttttgcttattcttggggt
gaagtaagtgagatgccagctgatactcaaatgggtatgatgaaaaaattcaaggaatat
ggatttattatcaatccattgacaaaaatttttgataaagtggatgatcttatctcgtat
tattgttttatcgaagaatgtcgtcgtgatttaaattatgatattgatggggttgtttat
aaagttaatgacttggcgttacaaaggcgtttgggttgtgtatctcgttcgccgcgttgg
gctatagcccataaattttcagcagaaaaagcaagaactcttttggaagctattgatatt
caagtaggaagaactggagcgctcactcctgttgcgcgtcttacacctataactgttgga
ggggttatgattactcatgcaagcttacataatgagaattatatcagaggaattggtcat
aagggagagaaaatccgtgaggggcgtgatattcgtgtaggtgatacggtgattgtgcag
cgtgcaggagatgttattccccaaattgttgatgttattattgaaaagcgtcctgaaaat
actccatattttgtttttcctgattcatgtcctgcttgtggaagttatgctgttcgtgaa
gaaggagaagcggtatgtcggtgtacaggtgggctcatctgtccagcacaagcaattgag
cgtattcgtcatttcgtttcacgtaatgcttttgatattgaaggaattggtaaaaagcag
gtggagtttttcttttatgttcgagatgaaatgatgtacattcgttctccagttgatatt
tttactttaaaacgacgtcaagaaagtgcgttgactcgcctggaaagtatggaaggtttt
ggaagcctctcagtccgtaagctttatgatgctattgatgctcgccgagagattcctttg
agccgttttttgtttgcattgggtattcgtcatgttggggaggtaaatgcacgacgtctt
gcgcgtatttatcaaaattacactgcttttgaaaccgctgtggtagctgccgtcccacag
tgtgatgagacaagtaaaggtaatgaagcatggatggaattgatcagtattgaaggtatt
ggaactcgtgttgggaaagcaattgttgatttttatcgtgaagcgcggaaccgtgacgtg
atatctctgttactcaaagaggtaactcctcttcctgaaaaatctatcataacaaatcat
tcgttaatttcaggaaaggtggttgtttttacaggaactttagaacatatgtcgcgtgat
gaagcaaaagcactggcagaacgattaggcgctaaaacatcgagtactatttctaaaaat
actaattttcttattgtaggaactggggtaggatcaaaattaattaaggcaaaggaatta
ggagttaagattatagatgaagaaaattggcttcaattagttaaggagcatagcgtttaa
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integrated database retrieval system
