Borreliella andersonii: QIA45_02740
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Entry
QIA45_02740 CDS
T09475
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
band
Borreliella andersonii
Pathway
band03030
DNA replication
band03410
Base excision repair
band03420
Nucleotide excision repair
band03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
band00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QIA45_02740 (ligA)
03410 Base excision repair
QIA45_02740 (ligA)
03420 Nucleotide excision repair
QIA45_02740 (ligA)
03430 Mismatch repair
QIA45_02740 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
band03032
]
QIA45_02740 (ligA)
03400 DNA repair and recombination proteins [BR:
band03400
]
QIA45_02740 (ligA)
Enzymes [BR:
band01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
QIA45_02740 (ligA)
DNA replication proteins [BR:
band03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QIA45_02740 (ligA)
DNA repair and recombination proteins [BR:
band03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
QIA45_02740 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QIA45_02740 (ligA)
MMR (mismatch excision repair)
DNA ligase
QIA45_02740 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QIA45_02740 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
BRCT
HHH_5
PTCB-BRCT
DNA_ligase_ZBD
HHH_2
Zn_ribbon_RlmA
Motif
Other DBs
NCBI-ProteinID:
WNY65987
UniProt:
A0ABZ0CF99
LinkDB
All DBs
Position
559138..561120
Genome browser
AA seq
660 aa
AA seq
DB search
MSSKVQQEIADLKKLIRKWDKEYYIDSLPTVEDFVYDKHILRLQELESKYPEYKTLDSPT
LKFGSDLLNDFKEVEHSAPILSLDKVYDLNLLKSWIDKIDFNNSFNISVEPKIDGCSIVL
YYKDGFLEKALTRGNGKFGNDVTKNIRTIRYIPLFLDEKVDLVLRGEVYITKENFLKINK
FLEKPYTNSRNLASGILRRVDSREVANFPLNIFIYDFLNAGLEFKTNDLATAKLKKLGFK
VNPLIRFFNQKSSIEEVLNYIADITKKRDSFEYEIDGVVLKVGDFALRERLGYTAHHPKW
AMAYKFEALSGFSRVNSIVVQVGRSGKITPVANIDKVFVSGAFITSATLHNQDYIISIGL
NVGDVVKVSRRGDVIPAVEMVINKFSTGFFKVPGNCPACKTTVVKEGAHFFCPNNHCPSV
AVERIKYFCSKNCMDIEGFSNKIISFLFEKKFISSEIDLYTFDFHKLIEFKGFKDKKVNN
LINSIEASKKKPFSKLLLSMGIKDLGENTIRLLFLNNFNSFSKLFKLCQDRDFAFSTLLK
IKGIGEKIALNIIGAFNDSIMLNKFKFFENLEFKMEEFIEIDVENRLLVGKKFCITGTFN
GYSRSIVIDKLKNKGAIFSTCVTRSLDFLVVGEKAGSKLKKALSLNIKIMSFEDIKSYLD
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaaagtacagcaagaaattgcagacttgaagaagttgattagaaagtgggat
aaagagtattatatcgattctttacctactgttgaagattttgtatatgataagcatatt
ttaaggcttcaagagctagaaagtaagtaccccgaatataagactttagattctcctact
cttaaatttggcagtgatcttttaaatgattttaaagaggttgaacattctgctcctata
ttaagtcttgataaggtttatgatcttaatttgctaaaatcatggatagataagattgat
tttaataattcttttaatatttctgttgaaccaaagattgatggatgctctattgttctt
tattataaagatggttttcttgaaaaagctcttactaggggtaatggaaaatttggtaat
gacgttactaaaaacattagaaccattagatatatccctttatttcttgatgaaaaggtt
gatttagtattaagaggtgaggtttatattactaaagaaaattttttgaaaataaataaa
tttttggaaaagccttatactaattctagaaatttggcttcgggaatacttagaagggtt
gatagtagagaggtcgctaattttcctttaaatattttcatttatgattttttgaatgct
ggattggagtttaaaactaatgatttagctactgcgaaacttaagaaattgggttttaaa
gtcaatcctttgattaggttttttaatcaaaaaagttcgattgaagaagttttaaattac
atagcagatataacaaaaaaaagagattcttttgaatatgaaatagatggtgttgttctt
aaggttggcgattttgctttgagagaaagattggggtatactgcacatcatcctaaatgg
gcaatggcttacaaattcgaagcgctttcgggttttagtagggtaaatagcattgttgtt
caggttggacgtagtggcaaaattactccggttgctaatattgataaagtttttgtttca
ggagcttttattactagtgcaacattgcataatcaagattatataatatctattggttta
aatgttggtgatgttgttaaagtttcaaggagaggagatgtaattcctgctgttgaaatg
gtgataaataaattttcaacaggatttttcaaagttcctggtaattgtccagcttgcaaa
acgactgtagtaaaagagggagcgcattttttttgtccaaataatcattgtccttcagta
gcagtcgagagaataaaatatttttgtagtaaaaattgtatggatattgaagggttttct
aacaagataatttcttttctttttgagaaaaaatttatttcttcagaaattgatctttat
acatttgattttcacaagcttattgaatttaaagggtttaaagataaaaaggtaaataat
ttgataaattcaattgaagctagcaaaaaaaagccgtttagcaaattacttcttagtatg
ggaattaaagatttaggggaaaacacaataaggttgttatttcttaataattttaattca
ttttcaaaactttttaagctttgtcaagacagagattttgcattttcaacattgttgaaa
attaaaggcataggagaaaaaattgctctaaatattattggtgcttttaatgattcaata
atgcttaataaatttaaattttttgaaaatttggaatttaaaatggaagagtttattgag
attgatgttgagaatagattattggttggtaaaaagttttgcattactggaacttttaat
ggttattccaggtctattgttattgataagctaaaaaataaaggagcaatttttagcact
tgcgtgaccaggagtttggattttcttgttgtaggagaaaaagctggatcaaagcttaag
aaagctttaagtttaaatataaaaattatgtcttttgaagacataaaaagttatttagat
tag
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