KEGG   Bicyclus anynana (squinting bush brown): 112045252
Entry
112045252         CDS       T07476                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
bany  Bicyclus anynana (squinting bush brown)
Pathway
bany03018  RNA degradation
bany03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bany00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112045252
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112045252
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bany03019]
    112045252
   03041 Spliceosome [BR:bany03041]
    112045252
Messenger RNA biogenesis [BR:bany03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112045252
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     112045252
Spliceosome [BR:bany03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    112045252
 Complex C
  U2 snRNP components
    112045252
SSDB
Motif
Pfam: LSM TIG_SUH DUF150_C HydF_dimer
Other DBs
NCBI-GeneID: 112045252
NCBI-ProteinID: XP_023937132
UniProt: A0A6J1MW03
LinkDB
Position
19:4767574..4769112
AA seq 102 aa
MADDADAVAVMTVKEPLDLIRLSLDERIYVKMRNERELRGKLHAYDQHLNMVLGDAEETI
TTVEIDEETYEEVYRSTKRNIPMLFVRGDGVILVSPPVRVGV
NT seq 309 nt   +upstreamnt  +downstreamnt
atggcagacgacgctgatgctgtggcggtaatgacagtgaaggaacctttggatttaatc
aggcttagtctagatgaaagaatttatgtaaaaatgcgaaatgaacgcgaattacgtggg
aaactacatgcttatgatcaacatttaaatatggtattgggtgatgctgaggaaaccata
accacagttgaaattgatgaagaaacatatgaagaagtatacagatccaccaaaaggaat
atccctatgttatttgtaagaggtgatggggttatactagtatctccaccagtgagagtt
ggtgtgtag

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