Bicyclus anynana (squinting bush brown): 112046307
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Entry
112046307 CDS
T07476
Name
(RefSeq) general transcriptional corepressor trfA isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
bany
Bicyclus anynana (squinting bush brown)
Pathway
bany03440
Homologous recombination
bany03460
Fanconi anemia pathway
bany04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112046307
09124 Replication and repair
03440 Homologous recombination
112046307
03460 Fanconi anemia pathway
112046307
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bany01009
]
112046307
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bany04121
]
112046307
03036 Chromosome and associated proteins [BR:
bany03036
]
112046307
03400 DNA repair and recombination proteins [BR:
bany03400
]
112046307
Enzymes [BR:
bany01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112046307
Protein phosphatases and associated proteins [BR:
bany01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112046307
Ubiquitin system [BR:
bany04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112046307
Multi subunit type E3
BRCC complex
112046307
Chromosome and associated proteins [BR:
bany03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
112046307
DNA repair and recombination proteins [BR:
bany03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
112046307
BRCA1-A complex
112046307
BRCA1-B complex
112046307
BRCA1-C complex
112046307
BRCA complex
112046307
FA (Fanconi anemia) pathway
Downstream FA components
112046307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
RTT107_BRCT_5
zf-C3HC4_3
zf-C3HC4
Prok-RING_4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
112046307
NCBI-ProteinID:
XP_052739511
UniProt:
A0ABM3LKC3
LinkDB
All DBs
Position
9:complement(9024187..9038365)
Genome browser
AA seq
1160 aa
AA seq
DB search
MNFKNMNVSKLKKEILVQSDSVTCINCCKYYSVPTTASCGHSLCKGCWLARQTCPFCALT
VEKKALRLNEPLQIRTDHFVSLQNAFESLYNINLNDLTFDSDGEHHVTDWLDNSKNQFSA
PPTLPCSQFTEGTVQPLNQITSHVQIHTNNPKEKGPEINTIHLTRTKHYQQEDWDKIEVM
PEIERNENPQGTVDLEMFDFVDDKNKTQYSAHNPRRSSRKKDFSQGNVNKNLDNKLSKVG
KNWQNVKKTKKGLKEKLNNKNNNLNISIEMLKRIKYANKSGPPKIQQLSSDIDDNTPGNA
DEIITKHTIFNHNNQMNTEFSKDLSLIDRSANKNNILTKVQNNSSFLNVQKQKQMDIEMH
NEVEKNIRIDDDKTSKVNFFKRGPLNVMEVRTFNNEPVTNNFTNVKNDADTIEIILKIGE
TVTNICIQKKDNDVKVNYKSDRAIQTSLGTSDIEHKHDVLNTVENDNVNVQSNDKNNVID
CISSIEQIEKSQSNKINTASADTVSAKVIISDSEDKEHEDRSINVSLKERNENVFQKSGN
IVNSNCQAQLSLETIPEDADFSADLDIFDCDSVKEGNVQSLKSTVKTPSVIIMPTSKCNS
SSSGKKVNKRLRNDTEDILSNKKIKVTLDNDNKKTQKSDSKENIMDTESENINYDALMSQ
VFANIEADMENIPKTVHSTQLPTQISNTQISNSPRRMKANVKQNKMNKNTNEEANKKCSE
NVFSLLEREDANSEILKPLDGTRSIKENTVISASSPDEDGMENKETTSETIIDLVELSTP
VQDDDDKSVVEETPQKKTSFSKSKISNDLCLNKDLVDVQVSTDKMRSLNKISNVQIPDIE
SPSMSGDQSTSDVRKSPLETPLTITKFVNKITYKSTPVAKKSLDFGRGNDENDPDETLYP
SSVVAANTTQEREFMSKAFEQTLGTQDSCARRQRKATKLCVACTCLSSVEQNAVKQLCLQ
RNWMFAEKYTKNVTHLVVGVDEENKSQRSVKYVCALAASKWIVTFEWVEKCLQTKAFVNE
EPFEALDAVGEPGPRRSRLAKQKLFHGFTFYCMPPFSVMDIDSLKNILEASGGRVVGSPR
DLRVTEAPALLLAEPEETQVNRFTYLAMELKIVPVNYEWILNCLGSYTLKPIWDLLLCSA
SLLPPAVDKWPIELIIPSGE
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaaaaacatgaacgtatctaaattaaaaaaagaaattcttgttcagtcagac
agtgtaacgtgtataaattgttgtaaatattactctgttccaactacagcttcttgtggg
cattccttatgtaagggatgttggctggcgcggcagacctgcccattctgtgcattgaca
gttgaaaaaaaagctttgcgattaaatgaaccattacaaattcgcacggaccattttgtt
tcacttcaaaatgcatttgaatcactttataatataaatttaaatgatttgacttttgat
tctgatggagaacatcatgttacagattggctagataattctaaaaatcaattttcagcc
ccacctaccttaccttgttctcagtttactgaaggaacagtacaacctttaaaccagatc
acaagtcatgttcaaatacatactaataatccaaaggaaaaaggaccagaaattaacact
attcatttgaccagaactaaacactatcaacaagaggactgggacaaaattgaagtgatg
ccagaaatagaaagaaatgaaaatcctcaaggcacagttgatttagaaatgtttgatttt
gtagacgataaaaataaaacccagtattcagcacataatcctcgtagaagttcaaggaaa
aaagacttttctcaagggaatgtcaataaaaatttagataataaattaagtaaagttggt
aaaaattggcaaaatgttaaaaaaaccaaaaaaggattaaaggagaaattaaataacaaa
aataataatttaaatatttctattgaaatgttaaaaagaatcaaatatgctaataaatca
ggtccacctaaaatacagcaactgtctagtgatattgatgacaacactcctggaaacgct
gatgaaataataactaaacatacaatttttaatcataataatcaaatgaatacagaattt
tctaaagatctttcattaatagacagatctgcaaataaaaataatatattaactaaagtt
caaaataatagttcatttcttaatgttcaaaaacaaaaacaaatggatattgaaatgcat
aacgaagttgaaaaaaatatccgaattgatgatgataaaacttcaaaagtaaattttttt
aagagagggcctttgaatgtgatggaagttcgaacttttaataatgaacctgtaaccaat
aatttcacaaatgttaaaaacgatgcagataccattgaaattatactgaaaattggtgag
actgtgacaaatatttgcatacagaaaaaggataatgatgttaaagtaaattataagtct
gatagggcaatccagacatcccttggtacctctgatatagaacataaacatgacgtgctt
aatacagttgaaaacgacaatgtaaatgtacaaagtaatgacaaaaataatgttatagat
tgtatatcatcaatagaacaaatagagaaatctcagtctaacaaaataaatactgcatct
gcagacacagtatccgctaaagttataatttctgatagtgaagataaagaacatgaggat
cggagcataaatgtctcattaaaagaacgaaatgaaaatgtatttcaaaaatcaggtaat
attgtaaacagtaattgtcaagcccagctttctttggagacaattccagaagatgcagat
ttttcagcagacttagatatatttgactgtgattctgtaaaagagggcaatgttcagtcg
ttaaaatctactgtaaaaactccatcagtgataataatgcctacaagcaaatgtaactca
tcttcatcaggaaaaaaagtgaataaaagattaagaaacgacactgaagatatcttaagt
aataaaaaaattaaagtaacactggataatgacaataaaaaaacacagaagtcagattca
aaagaaaatataatggatactgaaagtgaaaacataaactatgatgcattgatgagtcag
gtatttgccaacattgaagctgatatggagaatattccgaaaacagtccacagcactcaa
ctgccgacacaaataagtaatacacaaataagcaattctccacgacgaatgaaagctaat
gtaaaacaaaataaaatgaataaaaatactaatgaagaagcaaacaaaaaatgtagcgaa
aatgttttttctttattagaaagagaagatgctaattcagagatcttaaagcctctagat
ggaactcggagtatcaaagaaaatacagtgatatcagcaagctcgcctgatgaggatgga
atggaaaacaaagaaaccacatcagaaactatcatagacttggtagagttgtccacacca
gtccaagatgatgatgataaaagtgttgttgaggaaacacctcaaaagaaaacgtccttc
tcaaaaagtaaaatcagcaatgatctatgtttaaataaggatttggttgatgtgcaagtt
tcgaccgacaaaatgagatctttgaacaagataagcaatgtgcaaatacctgacatagaa
tctccttccatgtcaggtgaccagagcacgagtgatgtaagaaaatcgcctctggaaaca
cctttaacaataacgaaatttgtgaataaaattacatataaatcaactcctgtggcgaaa
aaatcactcgattttggacgtggcaatgatgaaaatgacccagacgagaccctctatcca
agttctgtagtagcagctaatactacgcaggagagagagtttatgagcaaagcttttgag
caaactttgggaacccaggactcgtgtgctagaaggcaaaggaaagccactaaactatgt
gtggcatgcacctgtctttcgtccgttgaacagaatgcagtgaaacaactctgtttgcag
aggaactggatgttcgctgagaaatacacgaagaatgtaactcatctagtagttggagtg
gacgaagagaataaatcacagaggtccgtgaaatacgtttgtgctttggcagctagcaaa
tggattgttacattcgagtgggtggaaaaatgccttcaaacgaaggcctttgtaaatgaa
gagccgtttgaggcattagacgcagtgggagagcctggcccgaggaggtcgagactcgcc
aagcagaagctgttccatgggttcacgttctactgcatgccgcccttctccgtcatggat
attgactccctgaagaatatcttggaagcttctggaggacgcgtagtggggagcccgcgg
gacttgcgggtgacggaggcgcctgcgctcctattggccgagccagaggagacccaagtc
aatcgtttcacgtatcttgctatggagttgaaaatagtgccggtgaactatgaatggatc
ctcaactgcttgggatcgtacaccttgaagccgatatgggatctgttgctatgctccgcc
tcattgttgccgccggcggttgacaagtggcccatagagttgattataccgagcggtgaa
tga
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integrated database retrieval system
