Buchnera aphidicola 5A (Acyrthosiphon pisum): BUAP5A_066
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Entry
BUAP5A_066 CDS
T00820
Symbol
lig
Name
(GenBank) DNA ligase (NAD+)
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bap
Buchnera aphidicola 5A (Acyrthosiphon pisum)
Pathway
bap03030
DNA replication
bap03410
Base excision repair
bap03420
Nucleotide excision repair
bap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BUAP5A_066 (lig)
03410 Base excision repair
BUAP5A_066 (lig)
03420 Nucleotide excision repair
BUAP5A_066 (lig)
03430 Mismatch repair
BUAP5A_066 (lig)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bap03032
]
BUAP5A_066 (lig)
03400 DNA repair and recombination proteins [BR:
bap03400
]
BUAP5A_066 (lig)
Enzymes [BR:
bap01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BUAP5A_066 (lig)
DNA replication proteins [BR:
bap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BUAP5A_066 (lig)
DNA repair and recombination proteins [BR:
bap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BUAP5A_066 (lig)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BUAP5A_066 (lig)
MMR (mismatch excision repair)
DNA ligase
BUAP5A_066 (lig)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BUAP5A_066 (lig)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
Nlig-Ia
PTCB-BRCT
HHH_5
DNA_ligase_ZBD
RPA_interact_C
RNA_ligase
zf-C2H2_ZNF462
HHH
Motif
Other DBs
NCBI-ProteinID:
ACL30447
UniProt:
B8D8M5
LinkDB
All DBs
Position
72434..74461
Genome browser
AA seq
675 aa
AA seq
DB search
MTSTKDKIEKLRKILLKYEYFYHTLNQSIISDAEYDYLFRQLYELELKHKELIPSDSPTQ
KVGSHILQKFKKIKHFSPMLSLENTFDVNGYLNFKKRIKKSIHNNEPLSFCCELKLDGVA
ISIIYEEGIFVRAATRGDGFEGENITSNARMIDSIPLKLKGIDIPKRLEIRGEVFMLKSN
FIKLNKKYKLNQNKYFSNPRNAAAGSLRHIDPNITAERKLIFSCHGCDFFVKTNKELTTH
YQRLMKCLSWGIPVNKEIVICSSDIEIIQFYKKIAQKRNFLDFDIDGIVIKVNSLELQKK
IGSTTKSPRWAIAFKFSPKERITTLNDVKFQVGRTGVITPVAYFNPVYISGVMISKASLH
NKNEIERLNLHFNDTITICRSGDVIPRLLNVIEIRRCDNAKKIIFPSFCPVCNTELLENI
EEKLIRCHSGLTCDAQKKQALYHFFSKKSLYVVGLGPKIINELVEKGLVKNPIDFFYLKD
IDLIQLKNVGKRKSIKIINSIKKCKKTTLKCFIYALGIPGVGEVVAGKIANYFIKLDKLM
NSNILELNCISGVGKIISNNIFNYFSTISNREMVVKLIKQAGIFLNDQEIHKINSEKTYF
FNKKIVLTGVFKSFSRIELKTILLSLGAKISNNISRKTDFLIYGNNFGSKFFRAKDLDVK
IINQEELNSLIRIKE
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacatctactaaagataaaatcgaaaaattaaggaaaattcttttaaagtatgaatat
ttttatcatacattaaatcaatcaattatttctgatgcagaatatgattacttatttcgt
caattgtatgaattagaactaaaacataaagaacttattccttcagactcacctactcaa
aaagtaggatcgcacatattgcagaaatttaaaaaaattaaacatttttcccctatgtta
tcattagaaaatacctttgatgttaatggatatttaaactttaaaaaaagaattaaaaaa
tccatccataataatgagccattatccttttgttgtgaattaaaattagatggagtagct
attagtataatttatgaagaaggcatctttgtgcgagctgcaactcgcggtgatggtttt
gaaggagagaatattacatctaatgctcgaatgattgattccatccctttaaaattaaaa
ggaattgacatacctaaaagattagaaattcgaggtgaagtatttatgttgaaatcgaat
tttataaaattaaataaaaaatataaattaaatcaaaataaatatttctctaaccctcga
aatgcagcagcgggctcattgcgtcatattgatccaaatattacagctgaaagaaaatta
atattttcatgtcacggatgtgatttttttgtaaaaactaacaaagagctaacaactcat
tatcaacgattaatgaaatgtttatcttgggggataccagttaataaagaaattgttatt
tgttcaagtgacatagagattatccagttttataaaaaaattgcacaaaaaagaaatttt
cttgattttgatatagatggtattgttattaaagttaattctttagaattgcaaaagaaa
ataggatctaccacaaaatcaccgagatgggctatagcatttaaattttctcctaaagaa
aggattacaacattaaatgatgtgaaatttcaagttggtagaacgggcgtgattacacct
gtagcttattttaatcctgtctatatatctggagttatgattagtaaggcatcattacac
aataaaaatgaaatagaaagattgaacctacattttaatgatactattactatttgtcgt
tccggtgatgttataccaagattattaaatgttattgagataagacgttgtgacaatgca
aaaaaaattatttttcctagtttttgtccggtatgcaatacagaattattagaaaatatt
gaggaaaaattaattcgctgtcattctggattaacatgtgatgcgcaaaaaaaacaagca
ttatatcattttttttcaaaaaaatctttatatgtagtcggtttaggaccgaaaattatc
aatgaattagtagaaaagggattagttaagaatccaatagattttttttaccttaaagat
attgatttaattcaattgaaaaatgttggaaaacggaaaagtataaaaattattaatagt
attaaaaaatgtaaaaaaactactctgaaatgttttatttatgctttaggtatacctggt
gtaggagaggtggttgcgggaaaaatagcaaattattttataaaattagataaattgatg
aattctaatattttagaactaaattgtatttcaggagtagggaaaattatctcaaataat
atatttaattatttttctacaatttcaaatcgtgaaatggtggttaaattaataaaacaa
gccggaatttttttgaatgatcaagaaatccacaaaataaattcagaaaaaacttatttt
tttaataaaaaaattgttttaacaggggtttttaaatcgttttcaagaatagagttaaaa
acaattttattaagtttaggtgcaaaaatttcaaataatatttctagaaaaacagatttt
ttaatttatggcaataatttcggttcaaaattttttagagcaaaagatctagacgtcaaa
attattaatcaagaggagttaaattctttaattcgtattaaagagtag
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