Bradyrhizobium arachidis: WN72_37730
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Entry
WN72_37730 CDS
T06898
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
barh
Bradyrhizobium arachidis
Pathway
barh03030
DNA replication
barh03410
Base excision repair
barh03420
Nucleotide excision repair
barh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
barh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WN72_37730
03410 Base excision repair
WN72_37730
03420 Nucleotide excision repair
WN72_37730
03430 Mismatch repair
WN72_37730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
barh03032
]
WN72_37730
03400 DNA repair and recombination proteins [BR:
barh03400
]
WN72_37730
Enzymes [BR:
barh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
WN72_37730
DNA replication proteins [BR:
barh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
WN72_37730
DNA repair and recombination proteins [BR:
barh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
WN72_37730
NER (nucleotide excision repair)
GGR (global genome repair) factors
WN72_37730
MMR (mismatch excision repair)
DNA ligase
WN72_37730
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
WN72_37730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
PTCB-BRCT
Nlig-Ia
Motif
Other DBs
NCBI-ProteinID:
QOZ71392
UniProt:
A0AAE7TJI0
LinkDB
All DBs
Position
complement(7854202..7856355)
Genome browser
AA seq
717 aa
AA seq
DB search
MARAAKSKARPLRDVTELTKAQAKVEHMRLALELEEHDRRYYQEDAPSVTDAEYDALRQR
FNAIEKRFPEFVSADSPSQKVGAAPSGRFRKVRHSLPMLSLDNAFAEEDVRDFVGRIVRF
LKLDDGKVDFSAEPKIDGLSMSLRYEGGDLVTAATRGDGAEGEDVTANIRTLEDVPQKLK
GRNIPDICEVRGEVYMTKKAFLALNERQKAAGDTIFANPRNSAAGSLRQKDPTITASRPL
GFFAYAWGEMSAMPEGTQSGMIGWFERCGFKTNPLTKLCHSVEELLAFHHSIEEQRARLD
YDIDGVVYKVDRIDWQERLGFVSRTPRWGIAHKFPAERAMTVLRDIEIQVGRTGSFTPVG
KLEPVGVGGVIVQNVTLHNEDYIKGIGNKGEVLREGRDIRIGDTVVIQRAGDVIPQVVDV
VLDKRPKTAREFHFPKKCPCPLHTDVTREETAAGEEGSRARCTGEFACPYQKIEHLKLFV
SRRAFDIDGLGEKQLQYFFDEGWVKEPADIFTLEKRNSKLKLEEIEGYGATSVRNLFGAI
ESRRKIALERFVYALGMRHVGETTALALARGYGSWDAFHDACLKVAKGDEEAMTDMDALD
QIGDTVIKSIADYFGESHNRGIVERLTKEVEIVDAEKPKSNSAVAGKTVVFTGSLEKMTR
DEAKATAERLGAKVSGSVSKKTDLVVAGPGAGSKLAEANKHGVKVLTEDEWLKLIGE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcaagagcagcaaaatccaaagcaaggccgcttcgcgacgtcaccgagctcaccaag
gcgcaggccaaggtcgagcacatgcggctcgcgctcgagctcgaagagcacgatcgccgc
tattatcaagaggacgcgcccagcgtcaccgacgccgaatacgacgcgctgcgccaacgc
ttcaacgcgatcgagaaacgctttccggaattcgtcagcgcggactcgccctcgcagaag
gtcggcgctgcgccgtcgggacgcttcaggaaggtgcgtcactcccttcccatgctgtcg
ctcgacaacgcctttgccgaagaggacgtgcgcgacttcgtcggccgcatcgtgcgcttc
ctgaagctcgacgacggcaaggtcgatttctccgccgagccgaagatcgacggcctgtcg
atgtcgctgcgctacgagggcggcgatctcgtcaccgcggcgacgcgcggcgacggcgcg
gaaggcgaggacgtcaccgccaacatccgcacgctcgaagacgtgccgcagaagctgaag
ggccgcaacatccccgacatctgcgaggtgcgcggcgaggtctacatgaccaagaaggcg
ttcctggcgctcaacgagcggcagaaggcggcgggcgacaccatcttcgccaacccgcgc
aactcggccgcgggctcgctgcggcagaaggacccgaccatcaccgcctcgcgtcccctg
ggcttcttcgcctatgcctggggcgagatgagcgcgatgcccgagggcacgcagagcggc
atgatcggctggttcgagcgctgcggcttcaagaccaatccgctgaccaagctgtgtcac
tcggtcgaggaactgctcgccttccatcattccatcgaggagcaacgcgcgcggctcgac
tacgacatcgacggcgtcgtctacaaggtcgaccgcatcgactggcaggagcggctcggc
ttcgtctcgcgcacgccccgttggggcatcgcgcacaaattcccggccgagcgcgccatg
acggtgctgcgcgacatcgagatccaggtcgggcgtaccggctcgttcacgccggtcggc
aagctcgaaccggtcggcgtcggcggcgtgatcgtgcagaacgtcaccctgcacaacgag
gactacatcaagggcatcggcaacaagggcgaggtgctgcgcgagggccgcgacatccgg
atcggcgacaccgtcgtgatccagcgcgccggcgacgtcattccgcaggtggtcgatgtc
gtcctcgacaagcggccgaagaccgccagggaatttcacttccccaagaagtgcccgtgc
ccgctgcacaccgacgtcacgcgcgaggagacggcggcgggcgaagagggctcgcgggcc
cgctgcaccggtgagttcgcctgcccctatcagaagatcgagcatctcaagctgttcgtc
tcgcggcgcgcgttcgacatcgatgggctcggggagaagcagctccagtatttctttgat
gaaggatgggtcaaggagcccgccgacatcttcacgctggagaagcgcaattcgaagctg
aagctcgaggagatcgaaggctacggcgcgacctcggtgcgcaatctgttcggcgcgatc
gagagccggcgcaaaatcgcgctggagcgtttcgtctatgccctcggcatgcgccatgtc
ggcgagaccacggcgctggcgctggcacgcggctacggctcctgggatgccttccacgac
gcctgcctcaaggtcgccaagggcgacgaggaggcgatgacggacatggacgcgctcgac
cagatcggcgacaccgtgatcaagagcatcgccgattatttcggcgagagccacaaccgc
ggcatcgtcgagcggctgaccaaagaggtcgaaatcgtcgacgccgagaagccgaagagc
aactccgccgtcgccggcaagacagtggtgttcaccggctcgctggagaagatgacgcgc
gacgaggccaaggccaccgcggagcgtctgggcgcgaaagtgtcgggctcggtgtcgaag
aagaccgatctcgtcgtcgccggccccggcgccggctcgaagctcgcggaggccaacaag
cacggcgtcaaggtgctgaccgaggacgagtggctgaagctgatcggggagtga
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