KEGG   Bradyrhizobium arachidis: WN72_37730
Entry
WN72_37730        CDS       T06898                                 
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
barh  Bradyrhizobium arachidis
Pathway
barh03030  DNA replication
barh03410  Base excision repair
barh03420  Nucleotide excision repair
barh03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:barh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    WN72_37730
   03410 Base excision repair
    WN72_37730
   03420 Nucleotide excision repair
    WN72_37730
   03430 Mismatch repair
    WN72_37730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:barh03032]
    WN72_37730
   03400 DNA repair and recombination proteins [BR:barh03400]
    WN72_37730
Enzymes [BR:barh01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     WN72_37730
DNA replication proteins [BR:barh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     WN72_37730
DNA repair and recombination proteins [BR:barh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     WN72_37730
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     WN72_37730
   MMR (mismatch excision repair)
    DNA ligase
     WN72_37730
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      WN72_37730
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB BRCT HHH_2 PTCB-BRCT Nlig-Ia
Other DBs
NCBI-ProteinID: QOZ71392
UniProt: A0AAE7TJI0
LinkDB
Position
complement(7854202..7856355)
AA seq 717 aa
MARAAKSKARPLRDVTELTKAQAKVEHMRLALELEEHDRRYYQEDAPSVTDAEYDALRQR
FNAIEKRFPEFVSADSPSQKVGAAPSGRFRKVRHSLPMLSLDNAFAEEDVRDFVGRIVRF
LKLDDGKVDFSAEPKIDGLSMSLRYEGGDLVTAATRGDGAEGEDVTANIRTLEDVPQKLK
GRNIPDICEVRGEVYMTKKAFLALNERQKAAGDTIFANPRNSAAGSLRQKDPTITASRPL
GFFAYAWGEMSAMPEGTQSGMIGWFERCGFKTNPLTKLCHSVEELLAFHHSIEEQRARLD
YDIDGVVYKVDRIDWQERLGFVSRTPRWGIAHKFPAERAMTVLRDIEIQVGRTGSFTPVG
KLEPVGVGGVIVQNVTLHNEDYIKGIGNKGEVLREGRDIRIGDTVVIQRAGDVIPQVVDV
VLDKRPKTAREFHFPKKCPCPLHTDVTREETAAGEEGSRARCTGEFACPYQKIEHLKLFV
SRRAFDIDGLGEKQLQYFFDEGWVKEPADIFTLEKRNSKLKLEEIEGYGATSVRNLFGAI
ESRRKIALERFVYALGMRHVGETTALALARGYGSWDAFHDACLKVAKGDEEAMTDMDALD
QIGDTVIKSIADYFGESHNRGIVERLTKEVEIVDAEKPKSNSAVAGKTVVFTGSLEKMTR
DEAKATAERLGAKVSGSVSKKTDLVVAGPGAGSKLAEANKHGVKVLTEDEWLKLIGE
NT seq 2154 nt   +upstreamnt  +downstreamnt
atggcaagagcagcaaaatccaaagcaaggccgcttcgcgacgtcaccgagctcaccaag
gcgcaggccaaggtcgagcacatgcggctcgcgctcgagctcgaagagcacgatcgccgc
tattatcaagaggacgcgcccagcgtcaccgacgccgaatacgacgcgctgcgccaacgc
ttcaacgcgatcgagaaacgctttccggaattcgtcagcgcggactcgccctcgcagaag
gtcggcgctgcgccgtcgggacgcttcaggaaggtgcgtcactcccttcccatgctgtcg
ctcgacaacgcctttgccgaagaggacgtgcgcgacttcgtcggccgcatcgtgcgcttc
ctgaagctcgacgacggcaaggtcgatttctccgccgagccgaagatcgacggcctgtcg
atgtcgctgcgctacgagggcggcgatctcgtcaccgcggcgacgcgcggcgacggcgcg
gaaggcgaggacgtcaccgccaacatccgcacgctcgaagacgtgccgcagaagctgaag
ggccgcaacatccccgacatctgcgaggtgcgcggcgaggtctacatgaccaagaaggcg
ttcctggcgctcaacgagcggcagaaggcggcgggcgacaccatcttcgccaacccgcgc
aactcggccgcgggctcgctgcggcagaaggacccgaccatcaccgcctcgcgtcccctg
ggcttcttcgcctatgcctggggcgagatgagcgcgatgcccgagggcacgcagagcggc
atgatcggctggttcgagcgctgcggcttcaagaccaatccgctgaccaagctgtgtcac
tcggtcgaggaactgctcgccttccatcattccatcgaggagcaacgcgcgcggctcgac
tacgacatcgacggcgtcgtctacaaggtcgaccgcatcgactggcaggagcggctcggc
ttcgtctcgcgcacgccccgttggggcatcgcgcacaaattcccggccgagcgcgccatg
acggtgctgcgcgacatcgagatccaggtcgggcgtaccggctcgttcacgccggtcggc
aagctcgaaccggtcggcgtcggcggcgtgatcgtgcagaacgtcaccctgcacaacgag
gactacatcaagggcatcggcaacaagggcgaggtgctgcgcgagggccgcgacatccgg
atcggcgacaccgtcgtgatccagcgcgccggcgacgtcattccgcaggtggtcgatgtc
gtcctcgacaagcggccgaagaccgccagggaatttcacttccccaagaagtgcccgtgc
ccgctgcacaccgacgtcacgcgcgaggagacggcggcgggcgaagagggctcgcgggcc
cgctgcaccggtgagttcgcctgcccctatcagaagatcgagcatctcaagctgttcgtc
tcgcggcgcgcgttcgacatcgatgggctcggggagaagcagctccagtatttctttgat
gaaggatgggtcaaggagcccgccgacatcttcacgctggagaagcgcaattcgaagctg
aagctcgaggagatcgaaggctacggcgcgacctcggtgcgcaatctgttcggcgcgatc
gagagccggcgcaaaatcgcgctggagcgtttcgtctatgccctcggcatgcgccatgtc
ggcgagaccacggcgctggcgctggcacgcggctacggctcctgggatgccttccacgac
gcctgcctcaaggtcgccaagggcgacgaggaggcgatgacggacatggacgcgctcgac
cagatcggcgacaccgtgatcaagagcatcgccgattatttcggcgagagccacaaccgc
ggcatcgtcgagcggctgaccaaagaggtcgaaatcgtcgacgccgagaagccgaagagc
aactccgccgtcgccggcaagacagtggtgttcaccggctcgctggagaagatgacgcgc
gacgaggccaaggccaccgcggagcgtctgggcgcgaaagtgtcgggctcggtgtcgaag
aagaccgatctcgtcgtcgccggccccggcgccggctcgaagctcgcggaggccaacaag
cacggcgtcaaggtgctgaccgaggacgagtggctgaagctgatcggggagtga

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