Borreliella tanukii: QIA26_03260
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Entry
QIA26_03260 CDS
T09341
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
batn
Borreliella tanukii
Pathway
batn03030
DNA replication
batn03410
Base excision repair
batn03420
Nucleotide excision repair
batn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
batn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QIA26_03260 (ligA)
03410 Base excision repair
QIA26_03260 (ligA)
03420 Nucleotide excision repair
QIA26_03260 (ligA)
03430 Mismatch repair
QIA26_03260 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
batn03032
]
QIA26_03260 (ligA)
03400 DNA repair and recombination proteins [BR:
batn03400
]
QIA26_03260 (ligA)
Enzymes [BR:
batn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
QIA26_03260 (ligA)
DNA replication proteins [BR:
batn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QIA26_03260 (ligA)
DNA repair and recombination proteins [BR:
batn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
QIA26_03260 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QIA26_03260 (ligA)
MMR (mismatch excision repair)
DNA ligase
QIA26_03260 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QIA26_03260 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
PTCB-BRCT
HHH_2
DNA_ligase_ZBD
HHH_5
PTSIIA_gutA
GerPB
CEBP_ZZ
Motif
Other DBs
NCBI-ProteinID:
WKC82682
LinkDB
All DBs
Position
562122..564104
Genome browser
AA seq
660 aa
AA seq
DB search
MSSKVQQEIADLKKLIRKWDKEYYVDSLPSVEDFIYDKHILRLQELESKYPEYKTLDSPT
LKFGSDLLNDFKEVEHSVPILSLDKVYDLNLLKTWIDKIDFNDSFNISVEPKIDGCSIVL
YYKDGILEKALTRGNGKFGNDVTKNVRTIRHIPLFIDEKVDLVLRGEVYITKENFFKINK
SLEKPYTNSRNLASGILRRVDSREVANFPLNIFIYDFLNAGLGFKTNNLATARLKKLGFK
VNPLIRFFDQKSSIEEVLSYIADITKKRNSFEYEIDGVVLKVSDFALRERLGYTSHHPKW
AMAYKFEALSGFSKVNSIVVQVGRSGKITPVANIDKVFVSGAFITNATLHNQDYIMSIDL
NVGDVVKVSRRGDVIPAVEMVINKFSTGFFKIPENCPACKTVVVKEGAHFFCTNNNCPSV
AVERIKYFCSKNCMDIEGFSDKIISFLFENKFISSEIDLYTFDFYKLLKFKGFKGRRINN
LINSIEASKKKPFSKLLLSMGIKELGENTIRLLFLNNLNSFSKLFRLCQDKDFAFLTLLK
IKGIGEKIAFNIIEAFNDSIMINKFKFFENLEFKMEECIVIDDESNLLAGKKFCITGAFN
GYSRSIIIDKLKNKGSIFKACVTKDLDFLVVGEKAGSKLEKASNLNIKIMSFEDIKNYLD
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaaagtacagcaagaaattgcagacctgaagaagttaatcagaaagtgggat
aaagagtactatgttgattctttgcctagtgttgaagattttatatatgataagcatatt
ttaaggcttcaagagttagaaagtaagtatcccgaatacaaaactttagattctcccact
cttaaatttggtagtgatcttttgaatgactttaaagaggttgaacattctgttcctata
ttaagtcttgataaggtttatgatcttaatttgctaaaaacatggatagataagattgat
tttaacgattcttttaatatttctgttgagccaaagattgatggatgttctattgttctt
tattataaagatggcattcttgaaaaagctcttactaggggtaatggaaaatttggtaat
gacgttactaagaatgttagaactattaggcatattcctttatttattgatgaaaaggtt
gatttagtattaaggggagaagtttatattactaaagaaaatttttttaaaataaataaa
tctttggaaaagccttacactaattctagaaatttagcttcgggaatacttagaagggtt
gatagcagagaagttgctaattttcctttaaatattttcatttatgattttttgaatgct
gggttggggtttaagactaataatttagctactgcaagacttaaaaaattgggttttaag
gttaatcctttgattaggttttttgatcaaaaaagttcaatcgaagaagttttaagttat
atagcagatataacaaaaaaaagaaattcttttgagtatgaaatagatggagttgttctt
aaggtcagcgattttgcgctaagagaaagattggggtatacttcacatcatcctaaatgg
gcaatggcttacaaatttgaagcgctttcaggttttagtaaggtaaatagtattgttgtt
caggttgggcgtagtggtaaaattactccggttgctaatattgataaagtttttgtttca
ggagcttttattactaatgcaacattgcacaatcaagattatataatgtcaattgattta
aatgttggtgatgttgttaaagtttcaagaaggggagatgtaattcctgctgttgaaatg
gtgataaataaattttcaacaggattttttaagattcctgagaattgtccagcttgcaaa
acggttgtagtaaaagaaggagcgcattttttttgtacaaataataattgtccttcagta
gcagttgagagaatcaaatatttttgcagtaaaaattgtatggatattgaaggattttct
gataagattatttcttttctttttgagaataaatttatttcttcagaaattgatctttat
acatttgatttttataaacttcttaaatttaaagggtttaaaggtagaaggataaataat
ttgataaattcaattgaagctagcaaaaaaaaaccatttagtaaattgcttcttagcatg
ggaattaaagagttaggggaaaacacaataaggttattatttcttaataatttaaattca
ttttcaaaactttttaggctttgtcaagataaggattttgcttttttaacattgttgaaa
attaaaggcatcggagaaaaaattgcttttaatattattgaagcttttaatgattcaata
atgattaataagtttaaattttttgaaaatttggaatttaaaatggaagagtgtattgtg
attgatgatgaaagcaatttattagctggtaaaaagttttgcattactggagcttttaat
ggttattctaggtccattattattgataagttaaaaaataaaggatcaatttttaaagct
tgtgtgactaaggatttagattttcttgttgtaggagaaaaagctgggtcaaaacttgaa
aaagcttcgaatttgaacataaaaattatgtcttttgaggacattaagaattacttagat
taa
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