Bacillus sp. WR11: D9C22_03595
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Entry
D9C22_03595 CDS
T11394
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bawr Bacillus sp. WR11
Pathway
bawr03030
DNA replication
bawr03410
Base excision repair
bawr03420
Nucleotide excision repair
bawr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bawr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D9C22_03595 (ligA)
03410 Base excision repair
D9C22_03595 (ligA)
03420 Nucleotide excision repair
D9C22_03595 (ligA)
03430 Mismatch repair
D9C22_03595 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bawr03032
]
D9C22_03595 (ligA)
03400 DNA repair and recombination proteins [BR:
bawr03400
]
D9C22_03595 (ligA)
Enzymes [BR:
bawr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
D9C22_03595 (ligA)
DNA replication proteins [BR:
bawr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
D9C22_03595 (ligA)
DNA repair and recombination proteins [BR:
bawr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
D9C22_03595 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D9C22_03595 (ligA)
MMR (mismatch excision repair)
DNA ligase
D9C22_03595 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
D9C22_03595 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QAT73678
LinkDB
All DBs
Position
690321..692327
Genome browser
AA seq
668 aa
AA seq
DB search
MDKETAKQRAEELRRTINKYSYEYYTLDEPSVPDAEYDRLMQELIAIEEEHPDLRTPDSP
TQRVGGAVLEAFQKVTHGTPMLSLGNAFNADDLRDFDRRVRQAVGDDVAYNVELKIDGLA
VSLRYEDGYFVRGATRGDGTTGEDITENLKTIRNIPLKMNRELSIEVRGEAYMPKRSFEA
LNEERIKNEEEPFANPRNAAAGSLRQLDPKIAAKRNLDIFVYSIAELDEMGVETQSQGLD
FLDELGFKTNQERKKCGDIEEVITLIDELQAKRADLPYEIDGIVIKVDSLDQQEELGFTA
KSPRWAIAYKFPAEEVVTKLLDIELNVGRTGVITPTAILEPVKVAGTTVSRASLHNEDLI
KEKDIRILDKVVVKKAGDIIPEVVNVLVEQRTGEEKEFSMPTECPECGSELVRIEGEVAL
RCINPECPAQIREGLIHFVSRNAMNIDGLGERVITQLFEENLVRNVADLYKLTKERVIQL
ERMGEKSTENLISSIQKSKENSLERLLFGLGIRFIGSKAAKTLAMHFESLENLKKASKEE
LLAVDEVGEKMADAVITYFHKEEMLELLNELQELGVNTLYKGPKKVKAEDSDSYFAGKTI
VLTGKLEELSRNEAKAQIEALGGKLTGSVSKNTDLVIAGEAAGSKLTKAQELNIEVWNEE
QLMGELKK
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagaaacagcgaagcagcgggcagaagaactgcgccgcaccatcaacaagtat
agctatgaatattacaccctagatgaaccgagcgtccctgatgcggaatatgacagattg
atgcaggagctgatcgcgatcgaggaggagcatccagacctcagaacgcctgactctcct
acgcagcgcgtcggcggagccgtgcttgaagcgtttcaaaaagtcacccacggcacaccg
atgctcagtctgggcaacgcctttaatgctgatgatcttcgtgatttcgaccgccgtgtg
cgccaagccgtcggcgatgatgtggcgtataatgtggagctgaaaatagacggtcttgct
gtttctctccgttatgaagacggctattttgtcagaggagccacccgaggtgacggaacg
acgggagaggatattacggagaatctgaagacgatccgcaatatccccctcaaaatgaac
cgtgagctgtcgatcgaagtgcgcggcgaggcgtatatgccgaagcgttcgtttgaagca
ctcaatgaggaacggattaaaaatgaggaagagccgttcgccaatccgcgaaatgccgcg
gcgggatctctcaggcagctcgatccgaaaattgcagcgaaacgaaacctcgatatcttc
gtctacagtatagcggagcttgacgagatgggtgtggagacgcaaagccaagggcttgat
tttctcgacgaactcggatttaaaacgaatcaggaacgaaaaaaatgcggcgacatagaa
gaagtcattacgctgatcgatgagcttcaggcgaagcgcgctgacctgccgtatgaaata
gacggcattgtcattaaagtcgattccctcgatcagcaggaggagctcggttttacggcg
aaaagcccgcgctgggccatcgcgtataagtttcctgctgaagaggtcgtgacgaagctt
ctcgatatcgaattaaatgtcggcagaacgggtgtgatcacgccgaccgcgattcttgag
ccggtaaaagttgccggcacaacggtctcaagagcatcccttcataacgaagatttaatt
aaagagaaggacattcggattttggataaggttgtcgtcaaaaaagcgggcgatatcatc
ccggaagttgtgaatgtcctcgttgaacagcgcacaggagaagaaaaggaattcagtatg
ccgacggaatgtcctgaatgcggcagtgagctcgtccggatcgaaggagaagtggcgctt
cgctgcattaaccctgaatgtccggcgcaaatccgggaagggctgatccatttcgtttcc
cgcaatgccatgaacattgatgggctcggcgaacgagtgatcacacagctgtttgaggaa
aaccttgtccgcaatgtggcagatttatataagctgacgaaggaacgagtcatccagctc
gagcgcatgggcgaaaagtccactgaaaacctgatcagctccatccaaaaatcaaaagaa
aattcgttagagcgcctgctgtttgggcttggcatccgttttatcggatcaaaggccgca
aaaacgcttgccatgcattttgaaagcttggagaacctgaaaaaagcctctaaagaggaa
cttctcgcggtagatgaagtcggtgaaaaaatggctgatgctgtgatcacctattttcat
aaagaagaaatgcttgaactcttgaatgaacttcaggagctgggcgtaaacacgctctac
aaaggcccgaaaaaagtaaaagcagaggacagcgactcttactttgccggtaaaacaatt
gttctgacaggaaagctggaagagctgtcaagaaacgaagccaaagcgcaaatcgaagcg
ctgggcggaaagctgactggaagcgtcagcaaaaacacagacttagtcatcgccggagaa
gcggcgggaagcaagctgacaaaagcacaagagctgaacattgaagtgtggaatgaagaa
cagttaatgggagagctaaagaaataa
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