Bacillus velezensis FZB42: RBAM_020490
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Entry
RBAM_020490 CDS
T00582
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bay
Bacillus velezensis FZB42
Pathway
bay03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBAM_020490 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bay03400
]
RBAM_020490 (nth)
Enzymes [BR:
bay01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RBAM_020490 (nth)
DNA repair and recombination proteins [BR:
bay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RBAM_020490 (nth)
Prokaryotic type
RBAM_020490 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
EDR1_CTR1_ARMC3_pept
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ABS74411
UniProt:
A7Z5Y5
LinkDB
All DBs
Position
complement(2150116..2150775)
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AA seq
219 aa
AA seq
DB search
MLNLKQIEYCLEKIGDMFPHAECELVHSNPFELVVAVALSAQCTDALVNRVTKTLFQKYK
RPEDYLAVSLEELQQDIKSIGLYRNKAKNIQKLSKMIIEEYGGEVPKDRDELVNLPGVGR
KTANVVVSVAFGVPAIAVDTHVERVSKRLGICRWKDSVLEVEKTLMKKVPKEDWSVTHHR
LIFFGRYHCKAQSPRCAECPLLPLCREGQKRDKKGLVKR
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaatttaaagcagattgaatattgtcttgaaaaaatcggcgatatgtttccgcac
gcagaatgtgaacttgtccattcaaatcctttcgaattggttgtggcagtcgcattatcc
gcgcaatgtacggatgctctcgtcaacagagtgacaaaaacgctatttcaaaaatataaa
cggcccgaagattatcttgccgtatcgctggaagaactccagcaggatattaaatcaatc
ggcctgtaccgtaataaagccaaaaatattcaaaagctgagcaaaatgatcatcgaagag
tacggcggagaagtgccgaaagaccgggatgagcttgtgaatctgccgggtgtcggacgg
aaaacggcaaatgtggtcgtgtctgttgctttcggcgtacctgcgattgcagtagacact
catgtggagcgggtctctaaacggctcggtatctgccgctggaaggactctgttttggaa
gtagagaaaacattaatgaaaaaagtgccgaaagaggattggtctgttacgcatcacaga
ttaatatttttcggcaggtatcattgtaaagcgcaatctccccgctgtgcggaatgtcct
ttgcttccgctgtgcagagaagggcagaagcgtgacaaaaaagggctggtgaaacggtga
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