Bifidobacterium animalis subsp. lactis BB-12: BIF_01112
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Entry
BIF_01112 CDS
T01840
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bbb
Bifidobacterium animalis subsp. lactis BB-12
Pathway
bbb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BIF_01112 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbb03400
]
BIF_01112 (nth)
Enzymes [BR:
bbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BIF_01112 (nth)
DNA repair and recombination proteins [BR:
bbb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BIF_01112 (nth)
Prokaryotic type
BIF_01112 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
EndIII_4Fe-2S
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ADC84848
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All DBs
Position
1723012..1723755
Genome browser
AA seq
247 aa
AA seq
DB search
MAGESRKARITRMHRQYETLCEFIPTVKCQLDFHTPFELLVATILSAQTTDKRVNSITPE
LFGTYPTAAALADARLEDVESIIRPLGFYHVKAEHIIAVARQIVERFGGQIPQTMEELTS
LPGVGRKTANVVLGNAFRVPGFPVDTHVIRVTGRLHWRDDWMKTSTTPERIEQEITGCFP
ESEWTDLSHRLIIFGRNICTSRSPECENCPLLPTCPSAGEFLEIAAERKARATRRAPRKP
RSRKTAK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgaaagcaggaaagcgcgcatcacacgcatgcacaggcagtatgagaccctg
tgcgagttcattccgacggtgaaatgccagctggatttccatacgccctttgagctgctg
gtcgcgacgattctgagcgcacagaccaccgacaagcgcgtcaattcgatcacgccggag
ctcttcggcacctaccccaccgccgcggcgctcgccgacgcccgcttggaggacgtcgag
agcattattcgcccgcttggcttctaccatgtgaaggccgagcacatcattgccgtggca
cggcagattgtggaacgattcggcgggcagataccgcagacaatggaggagctcacgtcg
ctgcccggcgtgggccgcaaaaccgcgaacgtcgtgcttggcaacgcgttccgcgttccc
ggattccccgtagacacccatgtgatccgtgtgaccgggcgcctgcattggcgtgatgac
tggatgaagacgagcacgacccccgaacgcatcgagcaggagatcaccggctgcttcccc
gaaagcgaatggaccgacctgtcgcaccggctcatcatcttcggccgcaacatctgcacg
agccgcagtcccgaatgcgagaactgcccactgctgcccacctgcccgagcgccggcgag
ttcctcgaaatcgccgccgagcgcaaggcgcgcgccacgcggcgcgcccccaggaagccg
cgttcgcgcaaaaccgccaagtga
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integrated database retrieval system
