Branchiostoma belcheri (Belcher's lancelet): 109461499
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Entry
109461499 CDS
T07532
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component-like isoform X1
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
bbel
Branchiostoma belcheri (Belcher's lancelet)
Pathway
bbel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109461499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbel03041
]
109461499
Spliceosome [BR:
bbel03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
109461499
Complex C
U5 SnRNP specific factors
109461499
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
Septin
Motif
Other DBs
NCBI-GeneID:
109461499
NCBI-ProteinID:
XP_019613426
UniProt:
A0A6P4Y9I0
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MDTELYDEFGNYIGPQLDSDDESEEEEEEAEHIRRAQDYGEDEDDADEAMDQDVEPSMAV
VLHEDKKYYPSAEEVYGADVETIVHEEDTQPLTEPIIKPVKRNKFAHIEQELPLTSYNME
YLADLMDNPELIRNVVLAGHLHHGKTTFVDCLMEQTHPDIFTKEDRQLRYTDTLFTEQER
GVSIKSQPVTLVLPDSRGKSYLMNVMDSPGHVNFSDEATAGYRLSDGVVLFVDAAEGVML
NTERLLKHAVQERLAITVCINKIDRLMLELKLPPTDAYYKLRQIVDEINGLLSVYSEESE
PVVVSPLMGNVCFASSQYRFCFTLQSFSKIYEDTYGGFSAKELSRRLWGDIYFNSKSRKF
TKKPPMSTSQRSFVEFILEPLYKIFAQVVGDVDSTLPRALEELGVHLTKEEMKMNIRPLL
KLICRRFFGDFTGFVDMCAEHIKSPYAAARTKVEHTYTGPLENELGDAMLECDPEGPLML
HTTKMYSTEDATQFLVFGRVMSGTIHANQDIRVLGESYTLDDEEDSRLVTCGRLWISEAR
YKVEVNRVPAGNWVLIEGVDQPIVKTSTITEARGNDEAYIFRSLKFNTSSVIKIAVEPVN
PSELPKMLDGLRKVNKSYPLLTTKVEESGEHVIMGTGELYLDCVMHDLRKMYSEIDIKVA
DPVVAFCETVVETSSLKCFAETPNKRNKITMIAEPLEKGLAEDIENEVVRITWNRKRLGE
FFQTKYDWDLLAARSIWAFGPDNTGPNILVDDTLPSEVDKGLLNSVKDSIVQGFQWGTRE
GPLCDEPIRNVKFKILDAVIAGEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEA
QAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAF
CLSVFHHWQIVPGDPLDKSIVIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFFDDP
MLLELARQDVMLNYPM
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggatacagagctgtacgatgagtttgggaactacatcggtccacagctggacagtgat
gatgagtcggaggaagaagaggaggaggcagaacacatcaggagggcgcaggactacgga
gaggatgaagatgatgcagatgaagctatggaccaggatgtggagccctccatggctgtg
gtcctacatgaggataagaagtactacccgagtgctgaggaagtgtatggggctgatgta
gagaccatagttcatgaagaggatactcaaccattgacagaaccaatcatcaagcccgtc
aagagaaacaagtttgcccacattgaacaggagctgccactgaccagctacaatatggaa
taccttgctgacttgatggataatccagagctgattaggaacgtggttctagctgggcat
cttcaccatgggaagactacttttgtggactgtctgatggagcagactcatcccgacatc
ttcactaaagaggacagacagctgagatatacagacacactcttcacagaacaggagaga
ggagtgagcattaagagccagccggtgactctggtcctgcctgactcccgtgggaagtct
tatctcatgaacgttatggactcaccaggccatgtaaacttttcagacgaggcgaccgcc
gggtaccgcctgagtgatggagttgtgctgtttgtggatgcagctgaaggggtgatgttg
aacacagagcgtctactgaaacatgcagtccaggagaggctggccatcactgtgtgtatc
aacaagattgaccggctcatgctggagctgaagcttccgccaacagacgcttactacaaa
ctcaggcagatcgtggatgaaatcaacggactactgagtgtatactctgaggagagtgag
cctgtagtggtgtctcccctcatggggaacgtgtgtttcgccagctcacagtacaggttc
tgtttcaccctgcagtccttctctaaaatatacgaggacacttacggtggttttagtgca
aaagagctgtctcgtaggttgtggggtgacatctacttcaactctaaaagtcggaagttc
accaagaagccacccatgagcacatcccagcgcagctttgtggagtttattctggagcca
ctgtacaagatttttgcacaggttgtaggtgatgttgactcgaccctcccccgtgccctt
gaggagctgggtgtccacctgactaaggaggagatgaagatgaatatcagaccactgctg
aagctcatctgtaggagattctttggagacttcacaggttttgttgatatgtgtgcggaa
cacatcaagtccccgtacgcagcggcgcgcaccaaagtggagcacacctacacaggccca
ctggagaacgaactgggagacgccatgttggagtgcgaccctgagggccccttgatgctc
cacaccactaagatgtactccacagaagacgcgacccagttcctggtgttcgggcgggtc
atgagcggaaccatccacgctaaccaggacatccgtgtactgggggagagttacacactg
gatgatgaggaggactccagactggtcacctgcggacggctgtggatatctgaggccagg
tacaaggtagaagtgaatagagtgcctgctgggaactgggtcctgatcgagggagtcgac
cagcccatcgtgaagacatccaccatcaccgaggccaggggcaacgacgaggcgtacatt
ttccgctccctgaagttcaacacgagttccgtcatcaagatcgcggtggagcccgtcaac
ccttcggagctgcccaagatgttggatggactccggaaagtcaacaagagctaccctcta
ctcactactaaggttgaggagtcgggtgaacatgtgatcatgggaacaggagaactgtac
ctggactgtgtcatgcatgacctacgcaaaatgtactctgaaatagacattaaggtggca
gacccggttgtggccttctgtgagacagttgtggagacgtcgtcactcaagtgttttgca
gagacaccaaacaaaaggaacaagatcaccatgattgctgagcccctggagaaaggcctg
gcggaggacatcgagaacgaggtggttcggatcacctggaaccggaagcgtctgggagag
ttcttccagactaagtatgactgggatcttctggccgctcgatccatctgggccttcggg
ccggataacaccggacctaacatcctggtggatgatacactgccgtcagaggtggacaag
ggactactgaactcagtcaaggacagtattgtacagggtttccagtgggggaccagggaa
ggcccgctctgcgacgagcccatcaggaacgtcaagtttaagatcctggacgccgtcatc
gcgggggagccgcttcaccggggcggcgggcagatcatcccgacggcgcgccgtgtcgcg
tactccgcgtttctcatggcgacaccacgcctcatggagccgtacctcttcgtggaggca
caggcacccgcagactgtgtgtcagctgtgtacacggtcctggctcggcggagaggtcat
gtaacccaggatgcaccaatcccaggctcccccctctacaccatcaaggccttcataccc
gccatcgactcctttgggttcgaaacggacttacggacacacacacagggccaggccttc
tgtctgtctgtgttccaccactggcagattgtgccaggtgaccccctggacaagagtatt
gtgatccgacctctggagccccagcctgccacacatctggctcgggagttcatgatcaaa
actcgacgaagaaagggtctgagtgaggatgtcagtatcaacaagttcttcgacgaccct
atgttgttggagttggccagacaagacgtcatgctcaactaccccatgtag
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