Besnoitia besnoiti: BESB_011680
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Entry
BESB_011680 CDS
T10139
Name
(RefSeq) LSM3, U6 small nuclear RNA associated isoform 2 family protein
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
bbes Besnoitia besnoiti
Pathway
bbes03018
RNA degradation
bbes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BESB_011680
09123 Folding, sorting and degradation
03018 RNA degradation
BESB_011680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbes03019
]
BESB_011680
03041 Spliceosome [BR:
bbes03041
]
BESB_011680
Messenger RNA biogenesis [BR:
bbes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BESB_011680
mRNA degradation factors
5'-3' decay
Lsm complex
BESB_011680
Spliceosome [BR:
bbes03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
BESB_011680
Complex C
U2 snRNP components
BESB_011680
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
40306230
NCBI-ProteinID:
XP_029216565
UniProt:
A0A2A9M9G4
LinkDB
All DBs
Position
IX
Genome browser
AA seq
96 aa
AA seq
DB search
MDSSTLLQEPLDIVRVSLDERVTVKCRGDRELVGKLHAYDMHLNMVLGDVEEVATTVAVD
TITGDEQTKRTTRRLPLIFLRGDAIILVAPVNSSNQ
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggattcctcaacgctcctccaggagcccctggacattgtgcgagtcagcctggacgaa
cgcgtgactgtcaagtgcagaggagaccgggaacttgttggcaagctgcacgcgtacgac
atgcatttaaacatggtgctgggcgacgtcgaggaagtcgcgaccaccgtagcggtggac
acgatcacaggtgacgagcaaacaaagaggaccaccaggcgacttccacttatttttctt
cgcggcgacgcgatcatccttgtggcgccggtgaactcgagcaaccagtga
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