Besnoitia besnoiti: BESB_017850
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Entry
BESB_017850 CDS
T10139
Name
(RefSeq) ABC transporter, ATP-binding domain-containing protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
bbes Besnoitia besnoiti
Pathway
bbes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BESB_017850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbes03019
]
BESB_017850
Messenger RNA biogenesis [BR:
bbes03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
BESB_017850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
Dynamin_N
MMR_HSR1
RsgA_GTPase
AAA_28
AAA_25
AAA_23
AAA_15
Motif
Other DBs
NCBI-GeneID:
40306846
NCBI-ProteinID:
XP_029216476
UniProt:
A0A2A9MA28
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Position
X:1644042..1647250
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AA seq
533 aa
AA seq
DB search
MPRLTTLPTQDSSHCNGEAGAARPAGSASAGRSELHRESSSPPTNGAATDDALTASPIAR
EPAPSPDSSVPMPSQPQASAPLPQNASEMSGNTSAAAVRVDRPVIQCKRLRYSYHNPARH
RPLSQTALQPVPEHLPPPTGSSLSTEFLDSMASAASAVDSGRTGTPTAGEAIDAEGERDA
QREWQLFDVSLEIPEGARVVVIGSNGAGKSTLLNILGGKMLIPEGMAFVLERPAFHDVTL
GRDVACLSEWWKGDFSLDVPLYDLVGPVVEAHIGEQLEKKGNACSAPHSASAPAAGEPPA
AAAPPGSWVWLFHGEGLFAPLPCCAAAPAQAGASLRTDCANYVAGPGADAAAGEEETECI
VSRVRRLVTLLGVDMRWRIARISDGERRRCQLLAALCEPRKVYILDEATSDLDLVSREGL
LRLLLHESTHRGATVLYSTHIFDGLDTWATHLLYIQKGRVKLYKPLSEISAIGELRASGH
SAPLYALVRRWLFGEWQHHPQLAALERKLRGSRAARPPARATATQLWRANLQA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgccacggttgacaacccttcccacccaggattcgagtcactgcaacggtgaagctggg
gctgctcgtcccgcgggttctgcttccgctgggcgctcggaactccatcgcgagtcttcc
tcgccaccgacgaatggcgctgctacagacgacgcgctgaccgcctcgcccatcgcccgc
gagcccgcaccgtcgcccgactcgtcagttcccatgccctctcaacctcaggcatcagcg
cctctccctcagaacgcctcagaaatgtctggaaacacatctgccgcggccgtgcgggta
gatcgcccggttatccagtgcaaacgtctgcgctattcctaccacaaccccgcgaggcac
cgcccgctgagtcagaccgcgctccagccggttcccgagcacttgcctccccccacaggc
agcagcttgagcaccgagtttctcgactcgatggcgtcggcggcctcggcagtggacagc
ggaagaacggggactccgacggcgggggaggcaatcgacgcagagggggagcgagacgcg
cagagagagtggcaactcttcgacgtctctctcgagattccagagggcgcccgagtcgtc
gtcattggaagcaatggggctggaaaaagcacgcttctcaacattctcggcggaaaaatg
ctcattcccgagggcatggccttcgttctcgagcgccccgccttccatgatgtgacgctc
gggcgcgacgtcgcctgcctgagtgaatggtggaagggagatttttcgctggacgtgccg
ctgtacgacctcgtggggcctgtggtggaggcgcacattggcgagcagctggagaagaag
ggcaacgcatgtagtgcgccacactccgcctcggcgccggctgcaggagagccaccagcc
gctgcggcgccgccagggtcctgggtatggctgttccacggcgagggcctgttcgccccg
cttccctgctgtgcggcggcccccgcgcaggccggcgcgtctctgcggaccgactgcgcg
aactacgtggcggggcctggcgcggatgccgccgcaggagaagaggaaactgagtgcatc
gtgagccgcgtgcggcggctggtgacgcttctgggcgtcgacatgcgctggcgcattgcg
cgcatcagcgatggcgagcggcgtcgctgtcagctcctcgccgcgctctgcgaaccgagg
aaggtttacatccttgacgaagcgacgagcgacctcgatctcgtttcccgagaagggctg
ctcaggcttctgctgcacgagtccacacaccgcggcgcgactgtcctctactccacgcac
atcttcgacggcttagacacctgggcaacgcatctgctctacatccagaaaggccgagtg
aagctctacaagcctctctcggagatctccgcgatcggcgagctgcgcgcgtcgggccat
agtgcgcctctgtacgccctcgtccgccgctggctgtttggcgagtggcagcatcaccct
cagctggcggctctggaacgtaagttgcgaggcagtcgagcagctcgaccgcctgcgcgc
gccacggcgactcagctgtggcgcgcaaatctgcaggcgtga
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