Bifidobacterium bifidum BGN4: BBB_0974
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Entry
BBB_0974 CDS
T02135
Symbol
vanYB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
bbf
Bifidobacterium bifidum BGN4
Pathway
bbf00550
Peptidoglycan biosynthesis
bbf01100
Metabolic pathways
bbf01502
Vancomycin resistance
bbf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bbf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BBB_0974 (vanYB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BBB_0974 (vanYB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BBB_0974 (vanYB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bbf01002
]
BBB_0974 (vanYB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bbf01011
]
BBB_0974 (vanYB)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
bbf01504
]
BBB_0974 (vanYB)
Enzymes [BR:
bbf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
BBB_0974 (vanYB)
Peptidases and inhibitors [BR:
bbf01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
BBB_0974 (vanYB)
Peptidoglycan biosynthesis and degradation proteins [BR:
bbf01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
BBB_0974 (vanYB)
Antimicrobial resistance genes [BR:
bbf01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
BBB_0974 (vanYB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
Peptidase_M15_4
Motif
Other DBs
NCBI-ProteinID:
AFL04566
UniProt:
I3WI53
LinkDB
All DBs
Position
complement(1171724..1172473)
Genome browser
AA seq
249 aa
AA seq
DB search
MERMMTGDGRVRTFAECRNRRNRRTLLRVSVVLGVLLAAILALLFCLGRFAGRGPFAPGV
AQAKYSPSSWSLIVVNRWNRIPDDYPAPKLTRLSNGESVDSRIYPDLQRMFDDMRAAGLH
PEVTSAYRTEAVQRQLLDEKIFLYQNEGASKEEARRQASQWVAEPGTSEHELGLAVDINA
SGATSTKDSVNEHQWLADNAWRYGFILRYPRGKTDVTGNAYESWHYRYVGAEAAKAMHES
GQTLEEYVK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggaacggatgatgacgggagacgggcgcgttcggacgttcgccgagtgccggaacaga
aggaaccgcaggacgctgctgcgcgtgtcggtcgtgctgggcgtcctgctcgccgccata
ctggcgctgctgttctgcctggggcgtttcgcgggccgggggccgtttgcgcccggcgtc
gcgcaggcgaaatactctccgtcgagctggagtctgattgtcgtcaaccggtggaacagg
attcccgacgactatccggcaccgaaactgaccaggctcagcaacggcgagagcgtggat
tcgcgcatctatcccgatctgcagcgcatgttcgatgacatgcgtgccgcggggcttcac
ccggaggtcacgtcggcgtaccgtacggaggccgtgcagcggcagctgctggacgagaag
atattcctgtatcagaacgagggcgcgtcgaaggaggaggcgagaagacaggcgtcgcaa
tgggtggccgagccggggaccagcgagcacgagctgggcctggcggtggacatcaacgcg
agcggggccaccagcaccaaggacagcgtcaacgagcaccagtggcttgcagacaacgcg
tggcggtacggattcatcctgcgctatccgcgagggaagaccgacgtgaccggcaacgcg
tatgaatcatggcattaccggtatgtgggagccgaggcggcgaaggcgatgcatgagtcc
ggccagacgcttgaagagtacgtgaagtag
DBGET
integrated database retrieval system
