Bison bison bison (American bison): 104982477 Help Entry 104982477         CDS       T08726                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism bbis  Bison bison bison (American bison) Pathway bbis04010   MAPK signaling pathway bbis04064   NF-kappa B signaling pathway bbis04120   Ubiquitin mediated proteolysis bbis04140   Autophagy - animal bbis04144   Endocytosis bbis04380   Osteoclast differentiation bbis04620   Toll-like receptor signaling pathway bbis04621   NOD-like receptor signaling pathway bbis04622   RIG-I-like receptor signaling pathway bbis04657   IL-17 signaling pathway bbis04722   Neurotrophin signaling pathway bbis04936   Alcoholic liver disease bbis05132   Salmonella infection bbis05133   Pertussis bbis05135   Yersinia infection bbis05140   Leishmaniasis bbis05142   Chagas disease bbis05145   Toxoplasmosis bbis05152   Tuberculosis bbis05160   Hepatitis C bbis05161   Hepatitis B bbis05162   Measles bbis05168   Herpes simplex virus 1 infection bbis05169   Epstein-Barr virus infection bbis05170   Human immunodeficiency virus 1 infection bbis05171   Coronavirus disease - COVID-19 bbis05200   Pathways in cancer bbis05222   Small cell lung cancer bbis05235   PD-L1 expression and PD-1 checkpoint pathway in cancer bbis05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:bbis00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     104982477 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     104982477 (TRAF6)    04064 NF-kappa B signaling pathway     104982477 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     104982477 (TRAF6)    04140 Autophagy - animal     104982477 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     104982477 (TRAF6)    04621 NOD-like receptor signaling pathway     104982477 (TRAF6)    04622 RIG-I-like receptor signaling pathway     104982477 (TRAF6)    04657 IL-17 signaling pathway     104982477 (TRAF6)   09156 Nervous system    04722 Neurotrophin signaling pathway     104982477 (TRAF6)   09158 Development and regeneration    04380 Osteoclast differentiation     104982477 (TRAF6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     104982477 (TRAF6)    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     104982477 (TRAF6)   09162 Cancer: specific types    05222 Small cell lung cancer     104982477 (TRAF6)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     104982477 (TRAF6)    05161 Hepatitis B     104982477 (TRAF6)    05160 Hepatitis C     104982477 (TRAF6)    05171 Coronavirus disease - COVID-19     104982477 (TRAF6)    05162 Measles     104982477 (TRAF6)    05168 Herpes simplex virus 1 infection     104982477 (TRAF6)    05169 Epstein-Barr virus infection     104982477 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     104982477 (TRAF6)    05135 Yersinia infection     104982477 (TRAF6)    05133 Pertussis     104982477 (TRAF6)    05152 Tuberculosis     104982477 (TRAF6)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     104982477 (TRAF6)    05140 Leishmaniasis     104982477 (TRAF6)    05142 Chagas disease     104982477 (TRAF6)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     104982477 (TRAF6)   09167 Endocrine and metabolic disease    04936 Alcoholic liver disease     104982477 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:bbis04131]     104982477 (TRAF6)    04121 Ubiquitin system [BR:bbis04121]     104982477 (TRAF6) Enzymes [BR:bbis01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      104982477 (TRAF6) Membrane trafficking [BR:bbis04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     104982477 (TRAF6) Ubiquitin system [BR:bbis04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     104982477 (TRAF6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 Sina_ZnF TRAF3_RING zf-RING_11 SlyX Med21 U-box Spc29 DUF16 PspA_IM30 DUF3450 DUF4455 ATG16 CENP-Q DUF1664 FlxA Motif Other DBs NCBI-GeneID:  104982477 NCBI-ProteinID:  XP_010830169 Ensembl:  ENSBBBG00000011532 UniProt:  A0A6P3GTG7 LinkDB All DBs Position Unknown AA seq 542 aa AA seqDB search MSLLHCENSCGSSQSESDCCAAMAASSCGTAAKDDSVSGTASTVTLSSSFMEEIQGYDVE FDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFP DNFAKREILSLMVKCPNEGCLHKMELRHLEEHQAHCEFALMSCPQCQRPFQKCHLNIHIL KECPRRQVPCENCAVSMAFEDKEIHEQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAP VPCTFSAFGCHEKMQRNHLARHLQENTQSHMRMMAQAVQTLSLAVAPVPQCTMPLYDSVP PTRPSSGRHSEVHNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVNELKRTIRTLEDK VAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPSA QRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAAVRQNHEEIMDAKPELLAFQ RPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDS GI NT seq 1629 nt NT seq  +upstreamnt  +downstreamnt atgagtctgctacactgtgaaaacagctgtggatccagccagtccgagagcgactgttgc gccgccatggctgccagctcctgtgggactgcagcaaaagacgacagtgtgagtgggacg gccagcacggtgactctctccagctctttcatggaggagatccaggggtacgacgtggaa tttgacccacccctggaaagcaaatacgagtgccccatttgcttgatggctttgcgggaa gcggtgcagacaccttgcggccacaggttctgcaaagcctgcatcatcaaatcaataagg gatgcaggtcacaaatgtccagttgacaatgaaatactgctggaaaaccaactatttcct gacaattttgcaaaacgagagattctttcgctgatggtgaaatgtccaaatgaaggttgt ttgcacaagatggaactgaggcatcttgaggagcatcaagcacactgtgagtttgctctt atgagttgtccacaatgccagcgtcccttccagaaatgccatcttaatattcatattctc aaggagtgtccaaggagacaggttccttgtgaaaactgtgctgtatcaatggcatttgaa gataaagagattcatgagcagaactgtcctttggcaaatgtcatctgtgaatactgcaat accatgctcatcagagaacagatgcccaatcactatgatctagactgccctacagcccca gtcccatgcacgttcagtgcttttggttgccatgaaaagatgcagaggaatcacttggca cggcacctgcaagagaatacccagtcgcatatgagaatgatggcccaggctgttcagact ttaagcctcgcggtagctcctgtgcctcaatgtaccatgcctctgtatgactctgtgcct cccacccggccttcctctgggcgtcactcagaagtccacaatttccaagaaaccattcaa cagttagagggtcgccttgtaagacaagaccatcaaatccgggaactgactgcaaaaatg gaaacccagagcatgtatgtaaatgagctcaagcgaactattcgaacccttgaggacaaa gttgctgaaatagaagcacagcagtgcaatgggatttacatctggaagattggcaacttt gggatgcacttgaaatcgcaggaagaggagaagcctgttgtcattcacagccccgggttc tacacaggcaaacccggctacaaactgtgcatgcggctgcacctgcagctgccgagcgcg cagcgctgcgccaactacatatcgctctttgtccacacgatgcaaggggagtacgacagc cacctgccgtggcccttccaggggacaatacgccttaccatccttgaccagtctgaagca gctgtgaggcaaaaccacgaagaaataatggacgccaaaccagagctcctggcctttcag agacccaccatcccccggaaccccaagggttttggctacgtgacttttatgcatctggaa gccctcagacaaagaaccttcatcaaggatgacacgttattagtacgctgtgaggtctcc acccgcttcgacatgggcagtcttcggagggagggttttcagccacggagtactgactca gggatatag

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