Bison bison bison (American bison): 105000611
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Entry
105000611 CDS
T08726
Symbol
SCN4A
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
bbis
Bison bison bison (American bison)
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bbis04040
]
105000611 (SCN4A)
Ion channels [BR:
bbis04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
105000611 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
105000611
NCBI-ProteinID:
XP_010854859
Ensembl:
ENSBBBG00000003281
UniProt:
A0A6P3IS15
LinkDB
All DBs
Position
Unknown
AA seq
1840 aa
AA seq
DB search
MAKASLPTVVPLGPEXLRPFTRESLAAIERRVLEEEARQLRNKQMEIEETEQKPRSDMEA
GKNLPLIYGDPPPELIGIPLEDLDPYYSDKKTFIVLNKGKSIFRFSATPALYILSPFSIV
RRCAIKVLIHSLFSMFIMITILTNCVFMTMSDPPSWSKHVEYTFTGIYTFESLIKILARG
FCIDDFTFLRDPWNWLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNSTWYGNDTW
YGNDTWGGNDTWGGNDTWGGQESWAGNYTFDWDAYISDEGNFYFLEGSNDALLCGNSSDA
GHCPEGYECIKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIF
FVVIIFLGSFYLINLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKFKKQQEELEKAK
AAQALEGGEVDGDPAHSKDCNGSLDTSAGEKGPPRPSCGTDSGISDAMEGECPASPDPSC
PPCPSGHSGSRGGGREGLAGPSFRTARKRWAPVSEQYPLCPVAWLFSSSFIHTHLWAMGT
HVPCSPPWGSVTLSSGLEGSAWRLKSGVGDSGGPVPLRLCTPHPPQVFTGIFTAEMVLKL
IAMDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNML
IKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIAADCNLPRWHMHDFFH
SFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVMVIGNLVVLNLFLALLLSSFSADS
LAASDEDGEMNNLQIAIARITWGIGFAKAFLVGLLHGKVLSPKVIMLSLGSIGEDGEAGE
APESAPEDEKKEPPPEEDGKDLKKDNHILNHVGLADGPPPSIELDHLNFINNPYLTIHVP
IASEESDLEMPTEEETDTFSEPEDVKKPLQPLDGNSSVCSTADYKPPEDDPEEQAEENPD
GEQPEECFTEACVQRFPFLYVDISQGRGKKWWTLRRACFKIVEHNWFETFIVFMILLSSG
ALAFEDIHIEQRRVIRTILEYADKVFTYIFILEMLLKWVAYGFKVYFTNAWCWLDFLIVD
VSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLV
CLIFWLIFSIMGVNLFAGKFYYCINTTTSERFDITEVNNKSVATFKGWMDIMYAAVDSRE
KEEQPQYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKK
YYNAMKKLGSKKPQKPIPRPQPDKLQSLVYPLPNPPSFDISIMILICLNMVTMMVETDDQ
SQLKVDILYNINMVFIIIFTGECVLKMLALRQYYFTVGWNIFDFVVVILSIVGLALSDLI
QKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYS
IFGMSNFAYVKKESGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPNL
ENPGTSIRGDCGNPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLGEDDF
EMFYETWEKFDPDATQFIDYSRLSDFVDTLQEPLRIAKPNKIKLITMDLPMVPGDKIHCL
DILFALTKEVLGDSGEMDALKETMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIKIQRA
YRRHLLQRSVKQASYMYRHNHDGGRDGAPEKEGLIADTMSKMYGPDNGNSGVPSKEEERG
STGDPGPAMGLRPISPSDAPLPPAPPLXQTVRPGVKESLV
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggcgtctctgcccacggtggtgcctctgggccccgagngcctacgccccttc
acccgggagtccctggcagccatagagcgccgggtgttggaggaggaggcccggcagttg
cggaacaagcagatggagatcgaggaaaccgagcagaagccgcgcagcgacatggaggct
ggcaagaacctgccgctcatctacggggaccccccgccggagctcattggtatccccctg
gaggatctggatccctactacagcgacaagaagaccttcatcgtgctcaacaagggcaag
tccatcttccgcttctcagccactcctgctctctacatcctgagccccttcagcatcgtc
agacgctgcgccatcaaggtgctcatccactcgctgttcagcatgttcattatgatcacc
atcctgaccaactgcgtgttcatgaccatgagtgacccgccttcctggtccaagcacgtg
gagtacaccttcacagggatctacaccttcgagtccctcatcaagatcctggcccgaggc
ttctgcatcgatgacttcacattcctccgggatccctggaactggctggacttcagcgtc
atcatgatggcgtacctgacggaatttgtggacttgggcaacatctcagcgctgagaacc
ttccgggtgctgcgggccctgaaaaccatcacggtcatcccagggctgaagaccatcgtg
ggggccctgatccagtccgtaaaaaaactctcggacgtgatgatcctcactgtcttctgc
ctgagcgtctttgccctggtggggctgcagctcttcatgggaaacctgcggcagaagtgt
gtgcgctggcccccgcccttcaatgacaccaactccacgtggtatggcaacgacacgtgg
tacggcaacgacacctggggcggcaacgacacctggggcggcaacgacacctggggcggc
caggagagctgggccggcaactatacctttgactgggatgcctacatcagtgatgaaggg
aacttctatttcctggagggctccaatgacgccctgctctgtgggaacagcagcgatgct
gggcattgccctgaaggttatgagtgcatcaaggctgggcggaaccccaactacggctac
accagctacgacaccttcagctgggccttcctggctctcttccgcctcatgacacaggac
tattgggagaacctcttccagctgacccttcgagcagccggcaagacctacatgatcttt
tttgtggtcatcattttcctgggctccttctacctcatcaacctgatcctggctgtggta
gccatggcctacgctgagcagaacgaggccaccctggccgaggatcaggagaaagaagag
gagtttcagcagatgctggagaaattcaaaaaacagcaggaggagctggagaaggccaag
gccgcccaggctctggaaggtggggaggtggacggggacccagcacacagcaaagactgc
aacggcagcctggacacatccgcgggggagaaggggcctccgaggccaagctgcggcaca
gacagcggtatttccgacgccatggaaggtgagtgcccagcatccccagacccatcctgc
ccaccctgcccatcgggccactccggctcccggggtgggggcagggagggcctggctggg
cccagcttcaggacagccaggaagagatgggccccggtctctgagcagtacccactctgc
ccggtggcatggctgttcagctcctcattcattcacacacacctgtgggccatgggtaca
catgtaccatgctcgcccccttggggctctgtcaccctctcttctggcctcgagggctct
gcctggaggttgaagagtggggtgggagactctggaggccctgtgcccctgaggctttgc
acaccccaccccccgcaggtcttcacaggcatcttcacagctgagatggtgctgaagctc
attgccatggacccctacgagtacttccagcagggctggaacatcttcgacagtatcatc
gtcaccctcagcctggtggagctgggcctggccaatgtgcaggggctgtcggtgctccgc
tccttccgtctgctgagggtcttcaagctggccaagtcatggccgacgctgaacatgctt
atcaagatcatcggcaactcggtgggggcactgggcaacctgacgctggtgctggccatc
attgtgttcatcttcgccgtggtgggcatgcagctgtttggcaagagctacaaggagtgc
gtgtgcaagatcgccgcggactgcaacctgccccgctggcacatgcatgacttcttccac
tcctttctcatcgtcttccgcatcctgtgcggggagtggatcgagaccatgtgggactgc
atggaggtggccggccaggccatgtgcctcactgtcttcctcatggtcatggtcatcggc
aacctggtggtcttgaacctgttcttggccctgctgctcagctcgttcagtgccgacagc
ctggcggcctcggacgaggatggcgagatgaacaacctgcagattgccatcgctcgcatc
acgtggggcatcggcttcgccaaagccttcctcgtggggctgctgcatggcaaggtgctg
agccccaaggttatcatgctcagccttggaagcatcggcgaggacggggaggccggcgag
gctccagaaagcgcccccgaggatgagaagaaggagcctccacccgaggaggatggcaag
gacctcaagaaggacaaccacatcctgaaccacgtgggcctggctgacggccctcccccc
agcattgagttggaccacctcaacttcatcaacaacccctacctgaccatccacgtgccc
atcgcctccgaggagtctgacctggagatgcccacagaggaggaaactgacaccttctct
gagcctgaggatgtcaagaagccgctgcagcccctggatgggaactcctccgtctgcagc
actgccgactacaagccccccgaggacgaccccgaggaacaggccgaggagaaccctgat
ggggagcagcctgaggagtgcttcaccgaggcctgcgtgcagcgctttcccttcctctac
gtggacatctcccagggtcgagggaagaagtggtggaccctccgcagggcctgcttcaag
atcgtcgagcacaactggtttgagaccttcattgtcttcatgatcctgctcagcagtggg
gccttggccttcgaggacatccacattgagcagcggcgagtcatccgcaccatcctggag
tacgccgacaaggtcttcacctacatcttcatcctggagatgctactcaagtgggtggcc
tacggcttcaaggtgtacttcaccaatgcctggtgctggcttgacttcctcatcgtggac
gtctccatcatcagcctggtggccaactggctgggctactcggagctgggacccatcaaa
tccctgcggacgctgcgggccctgcgccccctgagggcactgtctcgattcgagggcatg
agggtggtggtgaatgccctcctgggagccatcccctccatcatgaacgtgctgctcgtc
tgcctcatcttctggctcatcttcagcatcatgggcgtcaacctgtttgccggcaagttc
tactactgcatcaacaccaccacctccgagagattcgacatcaccgaggtcaacaacaag
tccgtggccaccttcaagggctggatggacatcatgtatgctgccgtggactcccgggag
aaggaagagcagccgcagtatgaggtgaacctctacatgtacctctatttcgtcatcttc
atcatcttcggctccttcttcaccctcaacctcttcattggcgtcatcatcgacaacttc
aaccagcagaagaagaagtttggagggaaagacatcttcatgacagaggaacagaagaaa
tactataacgccatgaagaagcttggctccaagaagcctcagaagccaattccccggccc
cagcctgacaaactccagtcactggtttaccccttgcctaacccgcccagctttgatatc
agcatcatgatccttatctgcctcaacatggtcaccatgatggtggagacggacgaccag
agccagctcaaggtggacatcctgtacaacatcaacatggtcttcatcatcatcttcacg
ggcgagtgcgtgctcaagatgctggccctgcgccagtactacttcaccgtcggctggaat
atcttcgactttgtggtcgtcatcctgtccattgtgggcctggcgctctccgacctgatc
cagaaatacttcgtgtcacccacgctgttccgtgtgatccgcctggcgaggatcggacgg
gtcctgcggctgatccgcggggccaagggcatccggacgctgctcttcgcgctcatgatg
tcgctgcccgccctcttcaacatcggcctcctcctcttcctggtcatgttcatctactcc
atcttcggcatgtccaacttcgcctacgtcaagaaggagtcgggcatcgacgacatgttt
aacttcgagacctttggcaacagcatcatctgcctcttcgagatcaccacgtcggccggc
tgggatgggctcctcaaccccatcctcaacagcgggccccccgactgtgaccccaacctg
gagaacccgggcaccagcatccggggcgactgcggcaacccctccatcggcatctgcttc
ttctgcagctacatcatcatttccttcctcatcgtggtcaacatgtacatcgccatcatc
ctggagaacttcaacgtggccacggaggagagcagcgagcctcttggggaggatgacttc
gagatgttctacgagacatgggagaagttcgaccctgacgccacgcagttcattgactac
agccgcctctccgacttcgtggacaccctgcaggagccgctgaggatcgccaagcccaac
aagatcaagctcatcacgatggacctgcccatggtgccgggggacaagatccactgcctg
gacatcctctttgccctgaccaaagaggtcctgggtgactccggggagatggacgccctc
aaggagaccatggaggagaagttcatggccgccaacccctccaaggtctcctatgagccc
atcaccaccaccctcaagaggaagcacgaagaagtgtgcgccatcaagatccagagggcc
taccgccggcatctgctgcagcgctccgtgaagcaggcctcttacatgtaccgccacaac
catgacggcggcagggacggggcccccgagaaggaggggctgatcgctgacaccatgagc
aagatgtacggccccgacaacgggaacagcggtgtgccgagcaaagaggaggagaggggc
tccacgggggaccccggacctgccatggggctcaggcccatcagcccctctgacgcaccc
ctccctcccgccccacccctgnggcagacggtgcgcccaggggtcaaagagtctctcgtc
tag
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