Bifidobacterium breve 12L: B12L_0248
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Entry
B12L_0248 CDS
T03118
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bbre
Bifidobacterium breve 12L
Pathway
bbre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B12L_0248 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbre03400
]
B12L_0248 (nth)
Enzymes [BR:
bbre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
B12L_0248 (nth)
DNA repair and recombination proteins [BR:
bbre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B12L_0248 (nth)
Prokaryotic type
B12L_0248 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
EndIII_4Fe-2S
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AHJ15044
LinkDB
All DBs
Position
complement(325989..326657)
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AA seq
222 aa
AA seq
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MRETKTARIERMHKEYDILCRMIPQPQCALHFTSPLQLLIATVLSAQTTDKRVNTVTPEL
FATYPTAHDLAEASPAQIEDIIHPLGFYRSKTQHLIGLATALDERFDGQVPQSMDELTSL
PGVGRKTANVVLGNAFGIPGFPVDTHVMRVTGRLRWRSDWRSTHPDPVKIEREITACFPP
EEWTDLSHRLILFGRSTCHARTPDCANCPLAATCPSAGISTK
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaaaccaaaaccgcgcgcatagagcgcatgcacaaggaatacgacattctatgc
cgtatgattccgcaaccgcagtgcgccctgcatttcacctccccgcttcaactgcttatc
gccactgtgctcagcgcccagaccaccgacaagcgtgtcaatacggtcacccccgaactg
ttcgccacgtatcccacggctcatgatttggcagaggccagcccggctcagatcgaggat
attatccatccgctcggcttctaccgatcgaaaacccagcatctcatcggcttggccacg
gcattggacgaacgctttgacggccaggtcccacaatcgatggatgagctgaccagcctg
ccaggcgttggccgcaaaaccgccaatgtggtgctgggcaacgctttcggcattcccggc
tttcccgtggacactcatgtgatgcgcgtgaccggtcgtctgcgctggcgatcggattgg
cgctccactcatccggatcccgtgaaaatcgagcgggagattaccgcatgcttcccacct
gaagagtggacagatctcagccatcggcttatcctgttcggccgatccacctgtcatgcc
cgcacgccggactgcgccaactgcccgctggccgccacctgccccagcgctgggatcagt
acaaagtga
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