Brettanomyces bruxellensis: BRETT_003098
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Entry
BRETT_003098 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRETT_003098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbrx03019
]
BRETT_003098
Messenger RNA biogenesis [BR:
bbrx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
BRETT_003098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_23
RsgA_GTPase
Rad17
AAA
AAA_15
AAA_25
AAA_22
AAA_14
nSTAND3
AAA_18
SRP54
VapE-like_dom
AAA_28
AAA_16
AAA_33
Arf
MMR_HSR1
ATP-synt_ab
Dynamin_N
AAA_27
S4
AAA_7
Motif
Other DBs
NCBI-GeneID:
64575022
NCBI-ProteinID:
XP_041139403
LinkDB
All DBs
Position
9:2966050..2967000
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AA seq
316 aa
AA seq
DB search
MDELEPLSICAEHLCYRYPNTKVGLFDINLKLKRGSRLLLVGPNGAGKSTLLKILAGQRL
IKDGKVLLNGRDPFDMRNRGNQIVTYLGTEWANNEITQRDIPVTVLVESIGGSYYKERRD
MLINLLDIDITWRMNQCSDGERRRVQLCMGLLKPWDLLLLDEVTVDLDVLVRYRLLEFLK
KETETRNCTIVYATHIFDGLGEWPTEIIHLNCGIIVRRYNPENINFLNKSEKPVDEEEID
ADEVEERNQIKMKVDIEKIRSFYPLALHWLKEDLKVRGERTEDKSKPNFDNLTKKLISFY
YDDKDRLDKYFRETQQ
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggatgaattagaacctttatcaatttgtgcagagcatttatgttaccgttacccaaat
acaaaagttggtctctttgacatcaacttgaaattaaagagaggatcaagacttctttta
gtgggaccaaacggagcgggaaagtctaccttgcttaaaattttggctggccaacgattg
attaaagatggaaaagttctattaaatggacgtgacccttttgatatgagaaatagaggc
aaccagatagttacttacttggggaccgagtgggccaataacgaaattacacaacgtgat
attcccgtgacagttttggtagagtccattggtggaagttattacaaggaaagaagggat
atgttaattaatcttttggacattgatattacttggaggatgaatcagtgctccgacggt
gagagaaggagggttcagttatgcatgggcttattaaagccttgggatttacttcttttg
gatgaggttaccgttgatttagacgtactagttaggtaccgtttgctagagtttttaaag
aaggaaacagagaccagaaattgcactattgtgtacgcaactcatatttttgatggccta
ggagagtggcccacggaaattattcatttgaactgcggtataattgtgaggcgatataat
ccggaaaacataaactttttaaataaatccgagaaaccggttgatgaggaggagattgat
gctgatgaagtggaggagcgtaatcaaataaaaatgaaagtggatatagaaaaaataagg
agtttctatccgttagcattacactggttaaaagaagaccttaaggtgaggggtgagaga
actgaagataaatcaaagccaaacttcgacaatttaactaaaaagctgatttcgttctat
tatgacgacaaagatcgcctggacaaatatttcagagagacgcaacaataa
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