Bradyrhizobium sp. BTAi1: BBta_1128
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Entry
BBta_1128 CDS
T00528
Symbol
ycdM
Name
(GenBank) monooxygenase of the alternative pyrimidine degradation pathway
KO
K09018
pyrimidine oxygenase [EC:
1.14.99.46
]
Organism
bbt
Bradyrhizobium sp. BTAi1
Pathway
bbt00240
Pyrimidine metabolism
bbt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bbt00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
BBta_1128 (ycdM)
Enzymes [BR:
bbt01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.46 pyrimidine oxygenase
BBta_1128 (ycdM)
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GFIT
Motif
Pfam:
Bac_luciferase
Motif
Other DBs
NCBI-ProteinID:
ABQ33377
UniProt:
A5EB33
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Position
1203423..1204505
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AA seq
360 aa
AA seq
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MDLGVFIPIGNNGWLISTASPQYKPTFELNKQIVQRAEHYGFEFALSMIKLRGFGGKSEF
WDYNLESFTLMAGLAAVTSRIKLFASTAVLTLPPAIVARMATTIDSISGGRFGINIVSGW
AKAEYEQMGLWPGDDYFGYRYAYSTEYVQVMQELWRTGASDFKGKYFQMTDCHMKPLPAH
KIEIVAAGQSPTGMAFAATYADYNFVLASGVNTPTAHVKLNEQLLDAVAKTGRDVGAYVL
FMVIADETDEAAMAKWQAYKDGTDVDALVWMADQGSKDQSAAGSSTAKTINLPEQALNFN
MGTIVGSYATVARLLDEAASVPGTKGLMLTFDDFVQGIESFGQHVQPLMTSRAARLLPAA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggatttgggcgtcttcatcccgatcggcaacaatggctggctgatctccacggcctcg
ccgcagtacaagccgacgttcgagctcaacaagcagatcgtgcagcgggcggagcattat
ggtttcgagttcgccctttcgatgatcaagctgcgtgggttcggcggcaagagcgagttc
tgggactacaatctggaaagcttcacgctgatggcggggctggccgcggtgacctcgcgg
atcaagctgttcgcgtccaccgcagtgctgaccctgccgccggcgatcgtcgcgcgcatg
gcaaccaccatcgattccatctccggcggccgcttcggcatcaatatcgtctccggctgg
gccaaggccgagtatgagcagatgggattgtggcccggcgacgactatttcggctaccgc
tacgcctattcgaccgagtatgtgcaggtgatgcaggagctgtggcggacgggggcctcc
gacttcaagggcaagtacttccagatgacggactgccacatgaagccgttgccggcgcac
aagatcgagatcgtggcggcggggcagagtccgaccggcatggccttcgccgcaacctac
gccgactataatttcgtgctcgcctccggcgtcaacacgccgaccgcccatgtcaagctc
aacgagcagttgctcgatgcggtcgccaagaccggccgcgacgtcggcgcctatgtcctg
ttcatggtgatcgcggacgagaccgacgaggcggccatggcgaagtggcaggcctacaag
gacggcaccgatgtcgatgcactggtctggatggctgaccagggctcgaaggaccagtcg
gcggcggggtcctcgaccgccaagaccatcaacctgccggagcaggcgctcaacttcaac
atgggaaccattgtcggctcctatgccacggtggccaggctgctcgacgaagccgccagc
gtgccggggacgaaaggcttgatgctgaccttcgacgatttcgtccagggcattgagagc
ttcggccagcatgtccagccgctgatgacatcccgcgccgcgcggctgttgccggcggcg
tga
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