Bradyrhizobium sp. BTAi1: BBta_6004
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Entry
BBta_6004 CDS
T00528
Name
(GenBank) Putative component of multidrug efflux pump, acrB/acrD/acrF family
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
bbt
Bradyrhizobium sp. BTAi1
Pathway
bbt01501
beta-Lactam resistance
bbt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
bbt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BBta_6004
01503 Cationic antimicrobial peptide (CAMP) resistance
BBta_6004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbt03036
]
BBta_6004
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bbt02000
]
BBta_6004
01504 Antimicrobial resistance genes [BR:
bbt01504
]
BBta_6004
Chromosome and associated proteins [BR:
bbt03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
BBta_6004
Transporters [BR:
bbt02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
BBta_6004
Antimicrobial resistance genes [BR:
bbt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BBta_6004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
DUF5667
Motif
Other DBs
NCBI-ProteinID:
ABQ37942
LinkDB
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Position
complement(6222874..6224010)
Genome browser
AA seq
378 aa
AA seq
DB search
MLLLVATISVVGCKEQEGASAAKAADAPAVGFITVQASPVTLTKILPGRITPMRIAEVRP
RISGIVTERGFQQGSVVEAGTVLYRIDPAPFQVELDKARAALAKAEAVLYQAERQEDRLK
SLLTSQSTSQAQYELALAAERQAEAEVAAQKAVVEQAQLNLEWATVRAPIKGRIGRALVT
EGALVSPTDAAHLATVQQLDPIYADFTQSAGELAQLKRDLANGRLKKVSSEAARVRLVLD
DGSVYKHSGRLLFSDVSVDPSTSKVNLRGEFPNPDADLLPGMYVRVQIEEAIDADGIVVP
SQAIQRTPAGGSAVFVINDQQRATLQPVRVGRSVDAGVMIEDGLKPGWRIVVDGFQKFSP
GEMVKPVAWRIAAPNSSN
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcttctcctggttgcgacgattagtgtcgtgggttgcaaggagcaggagggggcgtcg
gcagccaaggcggcggatgcgccggccgtcgggttcatcacggtccaggcgtcgccggtg
acgctcacgaagattctgccggggcgaattacgccgatgaggatcgcggaggtgcggcct
cgcatcagtggcatcgtgacagagcggggcttccagcagggcagcgtcgtcgaggcgggg
acggtactctatcggattgatccagccccgttccaggtcgagctggataaggcccgggcc
gcactggcaaaggctgaagccgtgctttatcaggccgaacgacaggaagatcggctcaag
tcgctattgacgagccagtcgacgtcgcaggctcaatatgagcttgcgctggcagccgag
cgccaggcggaggctgaagtggcggcacagaaagccgtcgtggaacaagctcagctcaat
cttgaatgggcgacggtcagagccccgatcaaggggcgtatcggacgtgcattggtgacc
gaaggggcgcttgtcagtccaacggatgcggcgcatctggcaacggttcagcagctcgat
ccgatctatgcggacttcacgcagtcggccggcgagcttgctcagctcaagcgcgacctt
gctaatggcagattgaaaaaggtgtcgtccgaagccgcgcgcgtgcggctcgttcttgat
gatggatcggtctacaagcatagcgggcgcctgttgttttccgacgtgagcgtcgatccc
agcacgtcgaaggtcaatttgcgcggggaattcccgaatccggacgcggatctgctgccc
ggaatgtatgtgcgtgttcagatcgaggaggcgatcgacgccgacggcatcgtcgttccg
tcgcaggcgatccagcggactccagccggtgggagcgcggtgttcgtgatcaacgatcag
cagagggcgacacttcagccggtgcgggttggccgctctgtcgatgccggcgtcatgatc
gaggacggtctgaagcctggatggcgcatcgtggtcgatggctttcagaagttctctcca
ggtgaaatggtgaagccggtcgcctggcggatcgccgctccgaactcatccaattga
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