Bradyrhizobium sp. BTAi1: BBta_6165
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Entry
BBta_6165 CDS
T00528
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
bbt
Bradyrhizobium sp. BTAi1
Pathway
bbt00540
Lipopolysaccharide biosynthesis
bbt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bbt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
BBta_6165 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bbt01005
]
BBta_6165 (lpxC)
Enzymes [BR:
bbt01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
BBta_6165 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
bbt01005
]
Lipid A
BBta_6165 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
ABQ38089
RhizoBase:
BBta_6165
UniProt:
A5EPJ5
LinkDB
All DBs
Position
complement(6399684..6400643)
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AA seq
319 aa
AA seq
DB search
MKFSRQTTLRSQATVTGIGVHSGTPVSLTLGPAPIDTGIVFVRTGLDGCDREVKAAFNSV
TATELATVLGDRNGPLVSTAEHVLAALCGMGIDNALIEIDGPEVPIMDGSAAPFVAAIDQ
AGILTQSAARRYIQVLKPVQVAIGRSVGELRPNSSGFQVEVEVDFANAVIGRQAYHFELS
PERFRREIARARTFGFMSDVARLWSAGYALGSSFENSLVFDEERLLNPEGLRYADECVRH
KVLDAIGDLALAGLPMLGTYRSVRGGHKLNHAVLTALMADRTAWRVVEGETVRRPRVAAE
AVGGMVGGMIAPAFGPDVS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagccggcaaaccacgcttcgttcgcaagccaccgtcactggtatcggcgta
cattccggcactcccgtcagcctgacccttggccccgcgccgatcgacaccgggatcgtg
ttcgtccgtaccggcctcgacggatgcgaccgcgaggtcaaggccgccttcaattccgtc
accgccaccgagcttgccaccgttctcggtgaccgcaacggtccgctcgtctcgaccgcc
gagcatgttctggccgcactgtgcggcatgggcatcgacaacgccttgatcgagatcgac
ggccccgaagttccgatcatggacggcagcgcagcgccgttcgtggcggcgatcgaccag
gccggcatcctcacccaatcggctgcgcgccgctacatccaggtgctcaagccggttcag
gtcgcaatcggccgctcggtcggcgagttgcgtccgaacagcagcggtttccaggtcgag
gtcgaggtcgacttcgccaacgccgtgatcggccggcaagcctatcatttcgagctcagc
ccggagcgcttccgtcgcgagatcgcgcgggcccggacgttcggcttcatgagcgacgtt
gcccggctctggagcgctggttacgccctcggttcctcgttcgagaattcgctggtgttc
gacgaagagcgcctgctcaatccggaaggcctccgctacgccgacgaatgcgtccgtcac
aaggtgctcgacgcgatcggtgatctggcgctggccggtctgccgatgctcggaacctat
cgctcggttcgcggcgggcataagcttaaccacgcggttctgaccgcgctgatggccgat
cgcaccgcgtggcgggtggtcgaaggcgagacggtgcgtcgtccgcgcgttgccgcagaa
gcggtcggcggcatggttggcggcatgatcgcccccgccttcggtccggatgtgtcctga
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