KEGG   Bubalus bubalis (water buffalo): 102392808
Entry
102392808         CDS       T05912                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DM beta chain
  KO
K06752  MHC class II antigen
Organism
bbub  Bubalus bubalis (water buffalo)
Pathway
bbub04145  Phagocytosis
bbub04514  Cell adhesion molecule (CAM) interaction
bbub04612  Antigen processing and presentation
bbub04640  Hematopoietic cell lineage
bbub04658  Th1 and Th2 cell differentiation
bbub04659  Th17 cell differentiation
bbub04672  Intestinal immune network for IgA production
bbub04940  Type I diabetes mellitus
bbub05140  Leishmaniasis
bbub05145  Toxoplasmosis
bbub05150  Staphylococcus aureus infection
bbub05152  Tuberculosis
bbub05164  Influenza A
bbub05166  Human T-cell leukemia virus 1 infection
bbub05168  Herpes simplex virus 1 infection
bbub05169  Epstein-Barr virus infection
bbub05310  Asthma
bbub05320  Autoimmune thyroid disease
bbub05321  Inflammatory bowel disease
bbub05322  Systemic lupus erythematosus
bbub05323  Rheumatoid arthritis
bbub05330  Allograft rejection
bbub05332  Graft-versus-host disease
bbub05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    102392808
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    102392808
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    102392808
   04612 Antigen processing and presentation
    102392808
   04658 Th1 and Th2 cell differentiation
    102392808
   04659 Th17 cell differentiation
    102392808
   04672 Intestinal immune network for IgA production
    102392808
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    102392808
   05164 Influenza A
    102392808
   05168 Herpes simplex virus 1 infection
    102392808
   05169 Epstein-Barr virus infection
    102392808
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    102392808
   05152 Tuberculosis
    102392808
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    102392808
   05140 Leishmaniasis
    102392808
  09163 Immune disease
   05310 Asthma
    102392808
   05322 Systemic lupus erythematosus
    102392808
   05323 Rheumatoid arthritis
    102392808
   05320 Autoimmune thyroid disease
    102392808
   05321 Inflammatory bowel disease
    102392808
   05330 Allograft rejection
    102392808
   05332 Graft-versus-host disease
    102392808
  09166 Cardiovascular disease
   05416 Viral myocarditis
    102392808
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    102392808
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bbub04147]
    102392808
Exosome [BR:bbub04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102392808
  Exosomal proteins of epithelial cells
   102392808
  Exosomal proteins of breast milk
   102392808
SSDB
Motif
Pfam: MHC_II_beta C1-set Ig_3 Ig_2 C2-set_2 C2-set_3 I-set ig DUF6316 YnaG
Other DBs
NCBI-GeneID: 102392808
NCBI-ProteinID: XP_006050352
UniProt: A0A059UJP6
LinkDB
Position
2:44562231..44569099
AA seq 262 aa
MTVLLSLLLGLSLGCTAAGGFVAHVESTCVLDDDGNPKDFSYCISFNKDLLTCWDPLQTS
MVPREFGVLNGLARYLSQFLNNNSDLILRLSSGLQNCAAHTQPFWSSLTHRTRPPTVQVA
KTTPFNTRESVMLACYVWGFYPADVAITWRRNGQEVLPHGRAQRIVQPNGDWTYQTVSHL
ATTPSFGDTYTCVVEHIGAPELILQDWTPGLLPAQTVKVSVSLVTLVLGLIVFVFGLRSW
RRATSSGYIFLPGSTYPEGQHN
NT seq 789 nt   +upstreamnt  +downstreamnt
atgactgtcctcctgtcgctgctgctgggcctcagcctgggctgcaccgcagcaggtggt
tttgtggcacacgtggaaagcacctgtgtgttggacgatgatgggaatccgaaagacttc
tcgtattgcatctccttcaacaaggatttgctgacctgctgggatcccctgcagaccagt
atggttcctcgtgaatttggggtgctgaacggcttggcccggtacctctcacagttcctc
aacaataacagtgacctgatccttcgcttgtccagtggtctgcagaactgtgccgcgcac
acccagcccttctggagctctctgacccacaggacacgcccaccgaccgtgcaggtagcc
aaaaccactccttttaacacgagggagtctgtgatgctggcctgctatgtgtggggcttc
tacccagcggacgtggccatcacgtggaggaggaacgggcaggaggtcctcccacacggc
agggcccagaggatcgtccagcccaacggagactggacataccagaccgtctcccatctg
gccacaaccccctcttttggggatacctacacctgtgtggtcgagcacattggggctcct
gaactcatcctccaggactggactcctgggctgttgcctgcgcagacggtgaaggtttct
gtgtctctggtaacgctggtcctgggtctcatcgtcttcgttttcggtctgcgcagttgg
cggagagccacctcctccggctacattttcctcccggggtccacttatccagaaggtcag
cacaattga

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