KEGG   Bubalus bubalis (water buffalo): 102394419
Entry
102394419         CDS       T05912                                 
Symbol
AFF4
Name
(RefSeq) AF4/FMR2 family member 4 isoform X1
  KO
K15185  AF4/FMR2 family member 4
Organism
bbub  Bubalus bubalis (water buffalo)
Pathway
bbub03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    102394419 (AFF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbub03021]
    102394419 (AFF4)
Transcription machinery [BR:bbub03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     102394419 (AFF4)
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int
Other DBs
NCBI-GeneID: 102394419
NCBI-ProteinID: XP_025148489
LinkDB
Position
9:66522741..66608328
AA seq 1164 aa
MNREDRNVLRMKERERRNQEIQQGDDAFPPSSPLFAEPYKVTSKEDKLSSRIQSMLGNYD
EMKDFIGDRSIPKLVAIPKPTVPPTADEKSNPNFFEQRHGSSHQSSKWTPVGPAPSTSQS
QKRSSGLQSGHSSQRASAGASGGTNSSGQRHDRDSYSSGGSSSRKKGQHGSEHSKSRSSS
PGKPQAVSSLSSSHSRSHGNDHHSKEHQRSKSPRDPDANWDSPSRVPFSSGQHSNQSFPP
SLMSKSSSMLQKPTAYVRPMDGQESMEPKLSSEHYSSQSHGNSMTELKPSSKAHLTKLKI
PSQPLDASASGDVSCVDEILKEMTHSWPPPLTAIHTPCKTEPSKFPFPTKESQQSSFGPG
EQKRYNPSSKTSNAHQSKSMLKDDLKLSSSEDSDGEQDCDKTMPRSTPGSNSEPSHHNSE
GADNSRDDSSSHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEPPPTNKWQLDNWLN
KVNPHKVSPASSVDSNIPSSQGYKKEGREQGTGNSYTDPGGPKETSSATPGRDSKTVQKG
SESGRGRQKSPAQSDSTAQRRTVGKKQPKKTEKAAAEEPRGGLKIESETPVDMATSMPSS
RHKAATKGSRKPNIKKESKSSPRPSAEKKKYKSTSKSSQKSREIIETDTSSSDSDESESL
PPSSQTPKYPESNRTPVKPSSVEEEDSFFRQRMFSPMEEKELLSPLSEPDDRYPLIVKID
LNLLTRIPGKPYKETEPPKGEKKNVPEKHTREAQKQASEKVSNKGKRKHKNEDDNRANES
KKPKTEDKNMAGHKPSSNKESSKQSAAKEKDLLPSPAGPVPSKDPKTEHGSRKRTVSQSS
SLKSSNNSNKENSASSKNSSSASKQKRTEGKTSSSSKEVKEKAPNSSSNCPPSAPTPDAS
KPRRTKLAFDDRNYSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALEKN
AQESKSPFLMYSETVELIKYTMKLKNYLAPDATAADKRLTVLCLRCQSLLYLRLFKLKKE
TALKYSKTLTEHLKNSYNNSQAPSPGLGSKAVGMPSPVSPKLSPGNSGNYSSGASSASAS
GSSVTIPQRIHHMAASYVQVTSNFLYATEIWDQAEQLSKEQKEFFAELDKVMGPLIFNAS
IMTDLVRYTRQGLHWLRQDAKLIS
NT seq 3495 nt   +upstreamnt  +downstreamnt
atgaaccgtgaagaccggaatgtgctgcgtatgaaagaacgggaaaggcggaatcaggaa
attcagcagggcgacgacgccttcccacctagctctcctctctttgctgagccatacaaa
gttactagcaaagaagataagctgtcaagtcgtattcagagtatgcttggaaactacgat
gaaatgaaggatttcataggagacagatctataccaaagcttgttgcaattcccaagcct
acagtaccgccgacagcagatgaaaaatctaacccaaatttctttgaacagagacatggg
agctctcatcagagtagcaaatggactccagtaggacctgcacccagcacttctcagtct
cagaaaaggtcctcgggcttacagagtggacacagtagccagcgggccagtgcaggtgcc
agtggtggcactaatagtagtggccagagacatgaccgtgactcatacagcagtggtggg
agcagtagccgaaaaaaaggccagcatggatcagaacactccaaatcacgctcttccagc
cctggaaaaccccaggctgtttcttcattaagctccagtcattccaggtctcatgggaat
gatcaccatagcaaagaacatcagcgttccaaatcacctcgggaccctgatgcaaactgg
gattctccttcccgtgtacctttttcaagtgggcagcactcaaatcagtctttcccacct
tcattgatgtcaaagtccagctcaatgctacagaaacccactgcctatgtgcggcccatg
gatggacaggagtccatggaaccaaagctgtcctctgaacactacagcagccagtctcat
ggcaacagcatgactgaactgaagcccagcagtaaagcacatctcaccaagctgaaaata
ccttcccaaccattggatgcatctgcttctggggatgtgagttgtgtggatgaaattctt
aaagagatgacgcattcatggcctccccctctaacggctattcatacaccatgcaaaaca
gaaccttccaaatttccttttccaactaaggagtctcagcagtccagttttggccctgga
gaacaaaaaagatataatccttcttctaaaacttcaaatgcacaccagtctaaatctatg
ctaaaagatgacttaaagctaagcagcagtgaagacagtgatggggaacaggattgtgat
aagacaatgccaaggagtacaccaggaagtaactctgaaccttcacaccataatagtgaa
ggggcagataactccagggatgattctagcagccacagtggatctgaaagcagctctgga
tctgactcagagagtgaaagtagttccagtgacagtgaggcaaatgagccatcccagagt
gcatctcctgagcctgaaccacctcccacaaataaatggcaacttgataactggctgaat
aaagtaaatccacataaagtgtcaccagcttcttctgtggacagtaatatcccatcatct
caaggctataaaaaggaaggccgagaacagggcacagggaatagctacacagatccaggt
ggtcctaaagaaacaagttctgctactcctggacgagactccaaaactgtccaaaaggga
tcagaaagtgggcgtgggaggcaaaagtctcctgcccagagtgacagcacagcacagagg
agaactgtaggaaaaaaacaacccaaaaagactgagaaggcagctgctgaagagccccgt
ggaggcctgaagatagagagtgaaactcctgtagacatggctaccagcatgccctccagc
agacacaaagcagccaccaaaggctcaagaaaacccaatataaaaaaggagtccaaatct
tcccctcgaccttcagcagagaaaaagaaatacaagtcaacaagtaaatcttcccagaaa
tcaagggaaattatagaaacagatacctcatcctcagattcggatgaaagcgagagcctt
cctccttcctcacaaactcctaagtaccctgagagtaataggactcccgttaaaccctcc
tcagtggaggaagaagatagcttttttcggcaacgaatgttctctcctatggaagagaag
gaacttctttcacccctcagtgagcctgatgacaggtatccacttattgtgaagattgac
ctgaatctcttgactagaataccaggaaagccttacaaagaaacagagccacccaagggg
gaaaagaaaaatgtgccagaaaagcacacaagagaggctcagaaacaagcctcagagaaa
gtttccaacaaaggcaagaggaaacataagaatgaagatgataaccgagccaatgagagc
aagaaacctaaaacagaggacaagaatatggcaggccacaagccatccagcaacaaagag
tcatctaaacagagtgctgctaaagaaaaagatttattgccttctcctgctgggcctgtt
ccttcaaaagatccaaaaacagagcatggctctcggaagaggactgttagtcagtcttct
tccttaaagtcaagtaataacagcaacaaggaaaatagtgccagcagcaaaaacagttcc
tccgcatcaaagcagaagaggactgaaggaaagacttccagtagctctaaggaggtcaag
gaaaaggctccaaatagttcttctaactgtcctccatctgcaccaactcctgatgcttct
aagcctcggagaacgaagcttgcctttgatgacagaaattattcagcagaccattattta
caagaagcaaaaaagctaaagcacaatgcagatgcattgtctgataggtttgagaaagct
gtatactatcttgatgctgtggtatctttcattgaatgtgggaatgcattagagaaaaat
gctcaggaatccaaatccccattccttatgtattcagaaacggtggagctcatcaaatac
actatgaagctaaagaattacttggcaccagatgctacagctgcagataaaagacttaca
gtgctatgcctgcgatgccagtctttgctgtacctgaggctcttcaaactgaagaaagaa
actgctctgaagtattcaaagacgctgacagagcatctgaagaattcttacaataactct
caagcaccatcaccaggcttgggaagcaaagctgttgggatgccttcccctgtttctcca
aagctgtcaccaggcaattcaggaaattattcttctggagccagtagtgcttcagcaagt
ggttcttcagtgaccattccacagaggattcaccacatggcagccagctatgttcaggtt
acatccaacttcctctatgccactgaaatttgggaccaagccgaacagctttccaaagag
caaaaagaattctttgctgaactggataaagtaatgggccctctcatctttaatgcaagc
atcatgacagacctagttcgttacacccggcagggactgcactggcttcgccaggatgcc
aagttgatatcctga

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