Bubalus bubalis (water buffalo): 102394903
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Entry
102394903 CDS
T05912
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe isoform X2
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub00514
Other types of O-glycan biosynthesis
bbub04330
Notch signaling pathway
bbub05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
102394903 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
102394903 (RFNG)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
102394903 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bbub01003
]
102394903 (RFNG)
Enzymes [BR:
bbub01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
102394903 (RFNG)
Glycosyltransferases [BR:
bbub01003
]
Glycan extension
O-Glycan
102394903 (RFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
102394903
NCBI-ProteinID:
XP_025135528
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All DBs
Position
3:complement(12393743..12397824)
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AA seq
336 aa
AA seq
DB search
MSRARGALCRACLALAAALGALLLLPLPRAPAPAPAPSRAVAPGSGPRAPPARPATAPRL
RPDDVFIAVKTTRKNHGPRLGLLLRTWISRARRQTFIFTDGDDPELQLQGGGHIINTNCS
AVHTRQALCCKMSVEYDKFIESGRKWFCHVDDDNYVNPKGLLQLLSTFSPSQDIYLGRPS
LDHPIEATERIQGGGTVTTVKFWFATGGAGFCLSRGLALKMSPWASLGGFMSTAERVRLP
DDCTVGYIVEGLLGARLLHSSLFHSHLENLQKLSPDTLLQQVTLSYGGPENPQNVVNVAG
GFSLQQDPTRFKSIHCLLYPDTDWCPVQKQSDLAPP
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgcgcggggggcgctttgccgggcctgcctcgcgctggccgcggccctgggt
gcgctgctgcttttgccgttgccccgcgcgcctgcgcccgcgccagccccgagccgggcc
gtggcccccggctccggcccgcgcgcgccccctgcccggcccgccaccgccccccgcctg
cggcccgacgacgtcttcatcgcggtcaagaccacccgaaaaaaccacgggccgcgcctg
gggctactgctgcgcacttggatctcccgggcccgacggcagacgtttatctttaccgac
ggagacgaccctgaactacagctccagggaggtggccacatcatcaacaccaactgctct
gccgtgcacacccgccaggctctgtgctgcaagatgtcagtggaatatgacaagtttatt
gagtccggacgcaagtggttctgccacgtggatgatgacaactatgtgaaccccaaaggc
ctgctgcagctgctgtccaccttctcacccagccaggacatctacctggggcggcccagc
ctggaccaccccatcgaggctaccgagaggatccagggaggtggaactgtgaccacggtc
aagttctggttcgctaccggtggggccgggttctgcctaagtagaggccttgctctcaag
atgagcccatgggccagcctgggcggcttcatgagcacagctgagcgggtacggctgcca
gacgactgcacggtgggctacatcgtggaggggctgctgggcgctcgcctgctgcacagc
tcgctgttccactcccacctggagaacctacagaagctgtcacccgacaccctgctccag
caggtcaccttgagctacgggggacccgagaacccacagaacgtggtgaacgtggctggg
ggcttcagcctgcagcaggatcccacccggtttaagtccatccactgccttctctacccg
gacacggattggtgtcctgtgcagaagcagagcgacctcgcccctccgtga
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integrated database retrieval system
