Bubalus bubalis (water buffalo): 102396152
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Entry
102396152 CDS
T05912
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X3
KO
K02084
apoptotic protease-activating factor
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub01524
Platinum drug resistance
bbub04115
p53 signaling pathway
bbub04210
Apoptosis
bbub04215
Apoptosis - multiple species
bbub05010
Alzheimer disease
bbub05012
Parkinson disease
bbub05014
Amyotrophic lateral sclerosis
bbub05016
Huntington disease
bbub05020
Prion disease
bbub05022
Pathways of neurodegeneration - multiple diseases
bbub05134
Legionellosis
bbub05152
Tuberculosis
bbub05160
Hepatitis C
bbub05161
Hepatitis B
bbub05162
Measles
bbub05164
Influenza A
bbub05168
Herpes simplex virus 1 infection
bbub05169
Epstein-Barr virus infection
bbub05200
Pathways in cancer
bbub05222
Small cell lung cancer
bbub05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
102396152 (APAF1)
04215 Apoptosis - multiple species
102396152 (APAF1)
04115 p53 signaling pathway
102396152 (APAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102396152 (APAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
102396152 (APAF1)
09172 Infectious disease: viral
05161 Hepatitis B
102396152 (APAF1)
05160 Hepatitis C
102396152 (APAF1)
05164 Influenza A
102396152 (APAF1)
05162 Measles
102396152 (APAF1)
05168 Herpes simplex virus 1 infection
102396152 (APAF1)
05169 Epstein-Barr virus infection
102396152 (APAF1)
09171 Infectious disease: bacterial
05134 Legionellosis
102396152 (APAF1)
05152 Tuberculosis
102396152 (APAF1)
09164 Neurodegenerative disease
05010 Alzheimer disease
102396152 (APAF1)
05012 Parkinson disease
102396152 (APAF1)
05014 Amyotrophic lateral sclerosis
102396152 (APAF1)
05016 Huntington disease
102396152 (APAF1)
05020 Prion disease
102396152 (APAF1)
05022 Pathways of neurodegeneration - multiple diseases
102396152 (APAF1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
102396152 (APAF1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
102396152 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
NB-ARC
EIF3I
WD40_MABP1-WDR62_2nd
WHD_APAF1
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
APAF1_C
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
CARD
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
WD40_like
RMC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Beta-prop_NWD2_C
eIF2A
WD40_RFWD3
CARD_2
Beta-prop_WDR11_2nd
Ge1_WD40
Beta-prop_DCAF4
Beta-prop_IFT140_2nd
PEP5_VPS11_N
Beta-prop_SPT8
AAA_16
Beta-prop_ACSF4
Beta-prop_RSE1_2nd
Utp8_b_propeller
AAA_22
NPHP3_N
ATPase_2
nSTAND6
AAA_18
SAS-6_N
DUF2677
NACHT
Motif
Other DBs
NCBI-GeneID:
102396152
NCBI-ProteinID:
XP_044797395
LinkDB
All DBs
Position
4:complement(57252482..57353202)
Genome browser
AA seq
1230 aa
AA seq
DB search
MDAKARNCLLQHREALERDIKTSYIMDHMISNGVLTVSEEEKVKNEPTQRQRAAMLIKMI
LKKDNHSYISFYNALLHEGYKDLAALLHGGIPVISSSDGKDSVSGITSYVRTVLCEGGVP
QRPVVFVTRKKLVNAIQQKLSKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHSFLEDCFPG
GVHWVSVGKQDKSGLLMKLQNLCARLDQDESFSQRLPLNIEEAKDRLRILMLRKHPRSLL
ILDDIWDPWVLKAFDNQCQILLTTRDKSVTDSVMGPKYVVPVESGLGKEKGLEILSLFVN
MKKADLPEQAHSIIQECKGSPLVVSLIGALLRDFPNRWEYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILWDLEMEEVEDILQEFVN
KSLLFCDRNGKSFLYYLHDLQVDFLTEKNRSQLQELCALMFSLDWIKAKTELVGPAHLIH
EFVEYRHILDEKDGTDCENFQEFLSLNGHLLGRRPFPNIVQLGLCELETSEVYRQAKLQA
KQEVDNGMLYLEWVNKKDMKNLSHLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKA
ETGEKLLEIKAHEDEVLCCAFSADDKFIATCSVDKKVKIWNSVTGELVRIYDEHSEQVNC
CHFTNNSNHLLLATGSNDYFLKLWDLNQEECRNTMFGHTNSVSHCRFSPDDQVLASCSAD
GTLKIELRLLETQKKNTLKVFRDRILISLLWDVKSANERKSINVKQFFLNSEEPQEDLEV
IVKCCSWSADGAKIMVAAKNKVFLFDIHASGLLAEIHMGHHSTVQYCDFSPHNHLAVVAL
SQYCVELWSMDSGLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSA
TVLKQEIDVVFQENEVTVLAVDNIRRLQLINGNTGQIDYLTEAQVSCCCLSPHLQYLAFG
GEDGAIQILELLNNKIFQSRNGHKTTVRHIQFTADGKTLISSSDDSAVQIWNWQSEDPFF
LQAHQETVKDFRLLKNSRLLTWSFDGTVKVWNIITRRIEKDFLCHQDTVLSCDISSDATK
FSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSSFSVDSTFLATGDDNGEIRIWNVSNG
ELLHLCAPISVEEGAATHGGWVTDLCFSPDTKMLVSAGGYLKWWNVVTGESSQTFYTNGT
NLKKIHVSPDFKTYVTVDNLGILYILKILE
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaagctcgaaattgtttgcttcaacatagagaagccttggaaagggacatc
aaaacatcctacatcatggatcacatgattagtaatggagttttaacagtgtcagaggag
gaaaaagtgaaaaatgagcccacccaacggcaacgagcagcaatgctaattaaaatgata
cttaaaaaagataatcattcctatatatcattctacaatgctctacttcatgaaggttac
aaagatcttgctgcccttctgcatggtggcattcctgtcatctcttcttccgatggcaaa
gattcagttagtggaataacttcgtatgtaaggacagtcctgtgtgaaggtggagtacca
cagaggcccgttgtttttgttactaggaagaagctagtgaatgcaattcagcagaagctc
tccaaactgaatggtgaaccaggatgggtcaccatatatgggatggcaggttgtgggaag
tctgtattagctgcagaagctgttcgagatcattctttcctagaagattgtttcccagga
ggcgtgcattgggtgtcagttgggaaacaggacaaatccgggcttctgatgaagctacag
aatctttgtgcacgattggatcaggatgagagcttctcccagaggcttccacttaatatt
gaagaggctaaagaccgtctccgcattctgatgctgcgcaaacatccaaggtctttattg
atcttggatgatatttgggatccttgggtgttaaaagcttttgacaatcagtgtcaaatt
cttctcacaaccagagataagagtgttacagattcagtaatgggtcctaaatatgtagtg
cctgtggagagtggtttaggaaaagaaaaaggacttgaaattttatccctttttgttaat
atgaagaaagcagatttgccagaacaagctcacagtattatacaagaatgtaaaggttcc
cctcttgtagtatctttaattggtgcacttttacgagattttcccaaccgctgggagtac
tacctcaggcaacttcagaataagcaatttaagaggataagaaaatcttcatcttatgac
tatgaggctctagatgaagccatgtctataagtgttgaaatgctcagagaagacatcaaa
gattattacacagatctttccatcttacagaaagatgttaaggtgcctacaaaggtgtta
tgtatcctctgggacttggaaatggaagaagttgaagacatattacaggaatttgttaat
aagtctctcttgttctgtgaccggaatggaaaatcatttctttattatttacatgatctg
caagtagatttccttactgaaaagaatcgcagccagcttcaggaactgtgtgctttaatg
ttttccctggattggattaaagcgaaaacggaactcgtaggccctgctcatctgattcat
gaatttgtggaatacaggcatatattggatgaaaaggatggtacagactgtgagaatttc
caggagtttttatctttaaatggacatcttcttggacgacggccatttcctaatattgtg
caactgggcctctgtgaactggaaacttcagaggtttatcggcaagctaagctgcaggcc
aagcaggaggtcgataacggaatgctttacctggagtgggtaaacaaaaaagacatgaag
aacctctcccacttggttgtccgcccccatacagatgctgtttaccatgcttgcttttct
gaagatggtcaaagaatagcttcttgtggagctgataaaactttacaggtattcaaagct
gaaacaggagagaaacttctagaaatcaaggctcatgaggatgaagtgctttgctgtgca
ttctctgcagatgacaaatttatagcaacctgctcagtggataaaaaagtgaagatttgg
aattcagtgactggggaactagtgcgtatctatgatgagcactcagagcaagtcaattgc
tgccacttcaccaacaacagtaatcaccttctcttagccactggttcaaatgactacttc
cttaaactctgggatctgaatcaagaagaatgtcgaaataccatgtttggccatacaaat
tcggtcagtcactgcagattttcaccagatgatcaggttttggccagttgttcagctgat
ggaacattaaagattgaattaagacttcttgaaactcagaagaaaaacactttaaaagtc
ttcagggacaggattctgatttcattgctttgggatgtgaaatctgcaaatgagaggaaa
agcattaatgtgaagcaattcttcctgaattcagaggagcctcaggaggatctggaagtg
atagtgaaatgctgttcgtggtctgctgatggtgctaagataatggtggctgcgaaaaat
aaagtctttctttttgacattcacgccagtggcctgttggcagaaatccacatgggccat
catagcactgtccagtactgtgacttctccccccacaaccatttggcagtggtggctttg
tcccagtactgtgtggagttgtggagtatggactcaggtttaaaagtagctgattgcaga
ggacatttaagttgggtccattgtgtgatgttttctcctgatggatcatcgtttttgaca
tcttctgatgaccagacaatcaggctctgggagacaaagaaagtatgtaagaactctgct
acagtgttaaagcaagaaatagatgttgtgtttcaagaaaatgaagtgacggttcttgca
gttgacaatataagacgtctgcaactcattaatggaaacacaggtcagattgattaccta
actgaagctcaagtgagttgctgttgtttaagtccacatcttcagtaccttgcattcgga
ggtgaagatggagccattcagattttagaactcctgaacaacaaaatcttccaatccagg
aatgggcataagaccactgttcggcacatccagttcacagctgatggaaagactcttatc
tcaagctctgatgattctgcagttcagatatggaactggcaatcagaggaccctttcttt
ctccaagcccaccaggaaacagtgaaagactttagactcttgaaaaattcaagacttctt
acctggtcatttgatggaacagtaaaggtatggaatattattaccagaagaatagaaaaa
gatttcctgtgtcaccaggataccgttctttcttgtgatatttcctctgacgctactaag
ttttcttctacctctgctgacaagactgcaaagatttggagttttgaactcctttctcct
cttcatgaattgagaggccacaaaggctgtgtgcgctgctcttccttctctgtggacagt
acctttttggcgactggagatgacaatggagaaatcaggatatggaatgtctcaaacggt
gagcttcttcatttgtgtgctccgatttcagtagaagaaggagctgctactcatggaggc
tgggtgaccgacctttgcttttctccagacaccaaaatgcttgtttctgctggaggatat
ctcaagtggtggaatgttgtcactggggaatcctcacagaccttctacacaaacggaacc
aatcttaagaaaatacatgtgtcccctgacttcaaaacatatgtgactgttgataatctt
ggtattttatatattctaaagattttagagtaa
DBGET
integrated database retrieval system
