Bubalus bubalis (water buffalo): 102396744
Help
Entry
102396744 CDS
T05912
Symbol
IRF5
Name
(RefSeq) interferon regulatory factor 5 isoform X1
KO
K09446
interferon regulatory factor 5
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
102396744 (IRF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbub03000
]
102396744 (IRF5)
Transcription factors [BR:
bbub03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
102396744 (IRF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
102396744
NCBI-ProteinID:
XP_045022391
LinkDB
All DBs
Position
8:92426764..92438998
Genome browser
AA seq
577 aa
AA seq
DB search
MLSHPLCPSPVLGTALGRGPQTRILSSVEVALSRYNPERSYFGPVNADAQEGRVVRKKEP
EALLPLKRLPPDLENTCAMNQPAPATLLPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKL
FYIPWRHATRHGPSHDGDNTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRL
IYDGPRDMPPQPYKIYEVCSNGPAPAESQPSEDNAEEEEEEELQKMLPGLSITEAVQPGP
AMAPYSLPKEDVKWPPTLQPPVVLAAPAPGPNLLVPAPGNAADFGEVFSEVLPSSQPQPG
PLSTSLAPTGEHLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPQGCRLFYSQLEA
TQEQVELFGPVSLEQVRFPSPEDIPSEKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQ
CKVFWSGPCASAQGSHPNPIQREVKTKLFSLEDFLNELILFQKGQTNTPPPFEIFFCFGE
EWPDCKPREKKLITVQVVPVAARMLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKEL
HHIWLSQQHLQPVAQTPAMPGLSAAQGPWPMHPVGMQ
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgctctcccatcctctctgtcccagcccagtgctgggcactgctctggggagaggccca
cagacaagaatccttagcagcgtggaggtggcacttagccgttacaacccagaaaggtcc
tactttggtccagtaaatgcagacgcccaggaggggcgagtggtgaggaagaaagaaccg
gaggcactcctgcccttgaagaggttgccccctgacctggaaaacacctgtgccatgaac
cagccggcccccgccaccctgcttccgccccggcgcgtgcggctgaagccctggctggtg
gcccaggtcaacagctgccagtacccagggcttcagtgggtcaatggggaaaagaaattg
ttttacatcccctggcgtcatgccacgcggcacggccctagccatgatggagataacacc
atcttcaaggcctgggccaaggagacggggaagtacaccgagggagtggacgaggccgat
ccggccaagtggaaggccaacctgcgctgtgccctgaacaagagccgtgacttccgcctc
atctatgacgggccccgggacatgccgcctcagccctacaagatctacgaggtctgctcc
aatggcccggctcccgcagagtcacagcccagtgaggataatgctgaggaagaagaagag
gaagagctccagaagatgttaccaggcctgagcatcacagaagcagtgcagcccggccct
gccatggcaccctattctttacccaaagaggatgtcaagtggccacccactctccagccg
cctgtggtgttggctgcccctgctccaggccccaacctgctggtccctgctcctggcaat
gccgctgactttggggaggtgttttctgaggtcctgccgagctcgcaaccgcagcctggg
cccctgtctaccagcctggcccccacaggcgaacacctcctgcccgacctgttgatcagc
ccccacatgctgcctctgactgacctggaaatcaagttccagtaccggggacggccaccc
cgggctctcaccatcagcaaccctcaaggctgccggctcttctacagccaactggaggcc
acccaggagcaggtggagctctttggcccggtgagcctggagcaagtgcgcttccccagc
ccggaggacatccccagtgagaagcagcgcttttataccaaccagctgctggacgtcctg
gaccgtgggctcatccttcagctacaaggccaggatctgtatgccatccgcctgtgccaa
tgcaaggtgttctggagcgggccctgtgcctcagcccagggctcacaccccaaccccatc
caacgggaggtcaagaccaagctcttcagcctggaggacttcctcaatgagctcatccta
ttccagaagggccagaccaacaccccacctccatttgagatcttcttctgcttcggggag
gagtggcctgactgcaaaccccgggagaagaagctcatcactgtacaggtggtacccgta
gcagcccggatgttgctggagatgttctcgggggagctttcttggtcagctgatagcatc
cggctacagatctcaaacccagacctcaaagaccgcatggtggaacagttcaaggagctc
catcacatctggctgtcccagcagcatctgcagcctgtagcccaaacccctgccatgcca
ggcctcagtgctgcacagggaccctggcccatgcacccagttggcatgcagtaa
DBGET
integrated database retrieval system
